miRNEST 2.0, an integrative microRNA resource :: BLAST
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
Query: 61 atcgatgaatgcaaactgcggaccaaaca 89
|||||||||||||||||||||||||||||
Sbjct: 61 atcgatgaatgcaaactgcggaccaaaca 89
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 2 tgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactga 60
Query: 62 tcgatgaatgcaaactgcggaccaaaca 89
||||||||||||||||||||||||||||
Sbjct: 61 tcgatgaatgcaaactgcggaccaaaca 88
>27062_eca-mir-181b:mirbase
Length = 89
Score = 168 bits (85), Expect = 4e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
Query: 61 atcgatgaatgcaaactgcggaccaaaca 89
||| |||||||||||||||||||||||||
Sbjct: 61 atcaatgaatgcaaactgcggaccaaaca 89
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 168 bits (85), Expect = 4e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
Query: 61 atcgatgaatgcaaactgcggaccaaaca 89
||| |||||||||||||||||||||||||
Sbjct: 61 atcaatgaatgcaaactgcggaccaaaca 89
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 60
Query: 64 gatgaatgcaaactgcggaccaaaca 89
|||||||||||||||||||||||||
Sbjct: 61 aatgaatgcaaactgcggaccaaaca 86
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactg 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 ctgatggctgcactcaacattcattgctgtcggtgggtttgactttgaatcaactcactg 60
Query: 61 atcgatgaatgcaaactgcggaccaaaca 89
||| ||||||| |||||||||||||||||
Sbjct: 61 atcaatgaatgtaaactgcggaccaaaca 89
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 2 tgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactga 61
||||||||||||||||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 2 tgatggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactga 61
Query: 62 tcgatgaatgcaaactgcggaccaaa 87
|| ||||||||||||||||| |||||
Sbjct: 62 tcaatgaatgcaaactgcgggccaaa 87
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 115 bits (58), Expect = 5e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 2 tgatggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactga 61
||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||
Sbjct: 1 tgatggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactgg 60
Query: 62 tcgatgaatgcaaactgcggaccaaa 87
|| ||||||||||||||||| |||||
Sbjct: 61 tcaatgaatgcaaactgcgggccaaa 86
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 111 bits (56), Expect = 8e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcgatgaatgcaaa 75
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcaatgaatgcaaa 60
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 91.7 bits (46), Expect = 8e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
Query: 64 gatgaatgcaaactgcggacca 85
|||||||||||||||||||||
Sbjct: 64 aatgaatgcaaactgcggacca 85
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 75.8 bits (38), Expect = 5e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 ggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcga 65
||||||| ||||||||||||||||||||||||||| | | ||||||||||||| | |
Sbjct: 1 ggctgcaatcaacattcattgctgtcggtgggttttcatttctatcaactcactgaccaa 60
Query: 66 tgaatgcaaactgc 79
||||||||||||||
Sbjct: 61 tgaatgcaaactgc 74
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
||||||||| | |||||||||||||||||||||||| ||| | | | |||| |||||
Sbjct: 2 atggctgcaataaacattcattgctgtcggtgggttgtagtttagaaaagctcattgatc 61
Query: 64 gatgaatgcaaactgcggacca 85
||||||||||||||| |||||
Sbjct: 62 aatgaatgcaaactgcagacca 83
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcgatgaatgcaaa 75
||||||||||||||||||||||||| || ||||||||||||| |||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtttctaatagacacaactcactgatcaatgaatgcaaa 75
Query: 76 ctgcgg 81
||||||
Sbjct: 76 ctgcgg 81
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggttt 39
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggttt 37
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||
Sbjct: 35 tcaacattcattgctgtcggtgggttt 61
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||
Sbjct: 12 tcaacattcattgctgtcggtgggttt 38
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||
Sbjct: 12 tcaacattcattgctgtcggtgggttt 38
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggtt 36
>27579_lla-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>28223_mne-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 10 tcaacattcattgctgtcggtgggtt 35
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 34 tcaacattcattgctgtcggtgggtt 59
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||||
Sbjct: 9 tcaacattcattgctgtcggtgggtt 34
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggttt 35
>31511_oan-mir-181b:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||
Sbjct: 27 aacattcattgctgtcggtgggttt 51
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggttt 35
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggttt 35
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>34332_dre-mir-181c:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 acattcattgctgtcggtgggttt 40
||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggttt 36
>27772_mml-mir-181d:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 34 tcaacattcattgttgtcggtgggtt 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 34 tcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 33 tcaacattcattgttgtcggtgggtt 58
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 33 tcaacattcattgttgtcggtgggtt 58
>31512_oan-mir-181c:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
|||||||||||| |||||||||||||
Sbjct: 17 tcaacattcattactgtcggtgggtt 42
>33249_bta-mir-181d:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 33 tcaacattcattgttgtcggtgggtt 58
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 7 tcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tcaacattcattgctgtcggtgggtt 39
||||||||||||| ||||||||||||
Sbjct: 7 tcaacattcattgttgtcggtgggtt 32
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||| ||||||||||||
Sbjct: 7 aacattcattgttgtcggtgggtt 30
>32767_rno-mir-181d:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||| ||||||||||||
Sbjct: 11 aacattcattgttgtcggtgggtt 34
