miRNEST 2.0, an integrative microRNA resource :: BLAST
>28503_hsa-mir-193b:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gtggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccct 60
Query: 61 caaagtcccgcttttggggtcat 83
|||||||||||||||||||||||
Sbjct: 61 caaagtcccgcttttggggtcat 83
>30884_ppy-mir-193b:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gtggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccct 60
Query: 61 caaagtcccgcttttggggtcat 83
|||||||||||||||||||||||
Sbjct: 61 caaagtcccgcttttggggtcat 83
>30268_ptr-mir-193b:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 2 tggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctc 60
Query: 62 aaagtcccgcttttggggtcat 83
||||||||||||||||||||||
Sbjct: 61 aaagtcccgcttttggggtcat 82
>33264_bta-mir-193b:mirbase
Length = 83
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 gtggtctcagaatcggggttttgagggcgagatgagtttatgttttatccaactggccct 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtcccagaatcggggttttgagggcgagatgagtttatgttttatccaactggccca 60
Query: 61 caaagtcccgcttttggggtcat 83
|||||||||||||||||||||||
Sbjct: 61 caaagtcccgcttttggggtcat 83
>31911_mmu-mir-193b:mirbase
Length = 79
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 8 cagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtc 67
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 5 cagaatcggggttttgagggcgagatgagtttgtgttttatccaactggcccacaaagtc 64
Query: 68 ccgcttttggggtca 82
|||||||||||||||
Sbjct: 65 ccgcttttggggtca 79
>27076_eca-mir-193b:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 8 cagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtc 67
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 cagaatcggggttttgagggcgagatgagtttatgttttatccaactggcccacaaagtc 60
Query: 68 ccgcttttg 76
|||||||||
Sbjct: 61 ccgcttttg 69
>31522_oan-mir-193:mirbase
Length = 95
Score = 115 bits (58), Expect = 5e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 8 cagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtc 67
|||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 12 cagagtcggggttttgagggcgagatgagtttgtgttttatccaactggcccacaaagtc 71
Query: 68 ccgcttttgg 77
||||||||||
Sbjct: 72 ccgcttttgg 81
>25983_gga-mir-193b:mirbase
Length = 83
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 8 cagaatcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtc 67
|||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 8 cagagtcggggttttgggggcgagatgagcttatgttttatccaactggcccacaaagtc 67
Query: 68 ccgcttttgg 77
||||||||||
Sbjct: 68 ccgcttttgg 77
>26490_tgu-mir-193a:mirbase
Length = 72
Score = 105 bits (53), Expect = 5e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 13 tcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtcccgct 72
||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 3 tcggggttttgggggcgagatgagcttatgttttatccaactggcccacaaagtcccgct 62
Query: 73 tttgg 77
|||||
Sbjct: 63 tttgg 67
>26749_cfa-mir-193b:mirbase
Length = 59
Score = 101 bits (51), Expect = 7e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 14 cggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtcccgct 72
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1 cggggttttgagggcgagatgagtttatgtttgatccaactggcccacaaagtcccgct 59
>25813_xtr-mir-193:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 13 tcggggttttgagggcgagatgagtttatgttttatccaactggccctcaaagtcccgct 72
||||| ||||| |||||||||||| | ||| |||||||||||||||| ||||||||||||
Sbjct: 13 tcgggattttgggggcgagatgagctaatgatttatccaactggcccgcaaagtcccgct 72
Query: 73 t 73
|
Sbjct: 73 t 73
>34344_dre-mir-193b:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 46 tatccaactggccctcaaagtcccgcttttggg 78
|||||||||||||| ||||||||||||| ||||
Sbjct: 47 tatccaactggcccgcaaagtcccgcttctggg 79
