miRNEST 2.0, an integrative microRNA resource :: BLAST
>28505_hsa-mir-194-2:mirbase
Length = 85
Score = 141 bits (71), Expect = 9e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 5 tcccgccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggctgct 64
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 5 tcccgccccctgtaacagcaactccatgtggaagtgcccactggttccagtggggctgct 64
Query: 65 gttatctggggcgagggcc 83
|||||||||||||||||||
Sbjct: 65 gttatctggggcgagggcc 83
>32781_rno-mir-194-2:mirbase
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 tggctcccgccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggc 60
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tggctcccaccccctgtaacagcaactccatgtggaagtgcccactgattccagtggggc 60
Query: 61 tgctgttatctgggg 75
|||||||||||||||
Sbjct: 61 tgctgttatctgggg 75
>27077_eca-mir-194:mirbase
Length = 85
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 2 ggctcccgccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggct 61
||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 2 ggctcccaccccctgtaacagcaactccatgtggaagtgcccactggttccagtggggct 61
Query: 62 gctgttatctggggcgagggcc 83
|||||||||||||||| |||||
Sbjct: 62 gctgttatctggggcgggggcc 83
>31913_mmu-mir-194-2:mirbase
Length = 86
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 1 tggctcccgccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggc 60
|||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 2 tggctcccaccctctgtaacagcaactccatgtggaagtgcccactggttccagtggggc 61
Query: 61 tgctgttatctgggg 75
|||||||||||||||
Sbjct: 62 tgctgttatctgggg 76
>33266_bta-mir-194-2:mirbase
Length = 83
Score = 93.7 bits (47), Expect = 2e-20
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 tggctcccgccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggc 60
|||||||| |||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1 tggctcccaccccctgtaacagcaactccatgtggaagt-acctctagttccagtggggc 59
Query: 61 tgctgttatctgggg 75
|||||||||||||||
Sbjct: 60 tgctgttatctgggg 74
>31524_oan-mir-194-2:mirbase
Length = 92
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 10 ccccctgtaacagcaactccatgtggaagtgtccactgattccagtggggctgctgttat 69
|||| |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||
Sbjct: 13 ccccttgtaacagcaactccatgtggaagggtctcctggttccagtggagctgctgttat 72
Query: 70 ct 71
||
Sbjct: 73 ct 74
>25815_xtr-mir-194-2:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 cctgtaacagcaactccatgtggaagt 39
|||||||||||||||||||||||||||
Sbjct: 13 cctgtaacagcaactccatgtggaagt 39
>31912_mmu-mir-194-1:mirbase
Length = 67
Score = 52.0 bits (26), Expect = 6e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtggaagtgtccactgattccagtggggctgctgtta 68
||||||||||||||||||||| | ||| | | ||||||||||| ||||||||||
Sbjct: 7 tgtaacagcaactccatgtgg-actgtgctcggattccagtggagctgctgtta 59
>32780_rno-mir-194-1:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtggaagtgtccactgattccagtggggctgctgtta 68
||||||||||||||||||||| | ||| ||| ||| ||||||| ||||||||||
Sbjct: 15 tgtaacagcaactccatgtgg-actgtgcacagatcccagtggagctgctgtta 67
>34345_dre-mir-194a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtggaag 38
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>34621_fru-mir-194:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtggaag 38
||||||||||||||||||||||||
Sbjct: 8 tgtaacagcaactccatgtggaag 31
>34768_tni-mir-194:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtggaag 38
||||||||||||||||||||||||
Sbjct: 11 tgtaacagcaactccatgtggaag 34
>25514_pma-mir-194:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 17 tgtaacagcaactccatgtgga 38
>25667_xla-mir-194:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>25814_xtr-mir-194-1:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>25984_gga-mir-194:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 14 tgtaacagcaactccatgtgga 35
>26492_tgu-mir-194-1:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 11 tgtaacagcaactccatgtgga 32
>26493_tgu-mir-194-2:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 11 tgtaacagcaactccatgtgga 32
>26750_cfa-mir-194:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 1 tgtaacagcaactccatgtgga 22
>27078_eca-mir-194-2:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>27514_age-mir-194:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>27787_mml-mir-194-1:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>28228_mne-mir-194:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>28321_ggo-mir-194:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>28504_hsa-mir-194-1:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>30269_ptr-mir-194:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>30885_ppy-mir-194:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtgga 36
>31523_oan-mir-194-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 22 tgtaacagcaactccatgtgga 43
>33265_bta-mir-194-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tgtaacagcaactccatgtgga 36
||||||||||||||||||||||
Sbjct: 21 tgtaacagcaactccatgtgga 42
>34023_ssc-mir-194:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ctgtaacagcaactccatgtgga 36
|||||||||| ||||||||||||
Sbjct: 10 ctgtaacagcgactccatgtgga 32
>34024_ssc-mir-194:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ctgtaacagcaactccatgtgga 36
|||||||||| ||||||||||||
Sbjct: 10 ctgtaacagcgactccatgtgga 32
