miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 61 attggttaggc 71
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcac 60
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 61 attggttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcac 60
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 61 attggttaggc 71
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcac 60
Query: 61 attggttagg 70
||||||||||
Sbjct: 61 attggttagg 70
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcac 60
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 61 attggttaggc 71
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 1 gccaacccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcac 60
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 61 attggttaggc 71
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 75 gccaacccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcac 16
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 15 attggttaggc 5
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 5 gccaacccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcac 64
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 65 attggttaggc 75
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 5 gccaacccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcac 64
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 65 attggttaggc 75
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 97.6 bits (49), Expect = 1e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 7 ccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattggt 66
||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattggt 60
Query: 67 t 67
|
Sbjct: 61 t 61
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 4e-18
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
|||| ||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1 gccatcccagtgttcagactacctgttcaggaggct-gggacatgtacagtagtctgcac 59
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 60 attggttaggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 4e-18
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 gccaacccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcac 60
|||| ||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1 gccatcccagtgttcagactacctgttcaggaggct-gggacatgtacagtagtctgcac 59
Query: 61 attggttaggc 71
|||||||||||
Sbjct: 60 attggttaggc 70
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 79.8 bits (40), Expect = 2e-16
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 25 acccagtgtttagactacctgttcagga--ctcccaaattgtacagtagtctgcacattg 82
Query: 65 gttaggc 71
|||||||
Sbjct: 83 gttaggc 89
>27085_eca-mir-199b:mirbase
Length = 69
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 5 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 62
Query: 65 gttaggc 71
|||||||
Sbjct: 63 gttaggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 5 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 62
Query: 65 gttaggc 71
|||||||
Sbjct: 63 gttaggc 69
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 25 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 82
Query: 65 gttaggc 71
|||||||
Sbjct: 83 gttaggc 89
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 25 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 82
Query: 65 gttaggc 71
|||||||
Sbjct: 83 gttaggc 89
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 25 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 82
Query: 65 gttaggc 71
|||||||
Sbjct: 83 gttaggc 89
>33276_bta-mir-199b:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 15 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 72
Query: 65 gttaggc 71
|||||||
Sbjct: 73 gttaggc 79
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 67 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 10
Query: 65 gttaggc 71
|||||||
Sbjct: 9 gttaggc 3
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattg 64
|||||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 7 acccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattg 64
Query: 65 gttaggc 71
|||||||
Sbjct: 65 gttaggc 71
>25517_pma-mir-199a:mirbase
Length = 79
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacg-tgtacagtagtctgcacattg 64
||||||||||||||||||||||||||||| | || | |||||||||||||||||||||
Sbjct: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
Query: 65 gttag 69
|||||
Sbjct: 68 gttag 72
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
Query: 66 ttaggc 71
||||||
Sbjct: 73 ttaggc 78
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
Query: 66 ttaggc 71
||||||
Sbjct: 60 ttaggc 65
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
Query: 66 ttaggc 71
||||||
Sbjct: 60 ttaggc 65
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 7 ccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattggt 66
|||||||| |||||| |||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 1 ccagtgtttagactatctgttcagga--ctcccaaattgtacagtagtctgcacattggt 58
Query: 67 t 67
|
Sbjct: 59 t 59
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 8e-10
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
||||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcagga--ttttactggtgtacagtagtctgcacattgg 72
Query: 66 ttag 69
||||
Sbjct: 73 ttag 76
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 51 tgtacagtagtctgcacattggttaggc 78
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 8/67 (11%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctca-ac--gtgtacagtagtctgcacat 62
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcagga-----tcatactggtgtacagtagtctgcacat 69
Query: 63 tggttag 69
|||||||
Sbjct: 70 tggttag 76
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 66 tgtacagtagtctgcacattggttaggc 93
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 30 cccagtgttcagactacctgttcagga 56
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcagga 34
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcagga 34
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 3e-09
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
|||||||||||||||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcatcag--actcaagctgaacagtagtctgcacattgg 72
Query: 66 tta 68
|||
Sbjct: 73 tta 75
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 19 cccagtgttcagactacctgttcagga 45
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 55 tgtacagtagtctgcacattggttag 80
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 29 cccagtgttcagactacctgttcagga 55
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 65 tgtacagtagtctgcacattggttag 90
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcagga 52
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 62 tgtacagtagtctgcacattggttag 87
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcagga 52
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 62 tgtacagtagtctgcacattggttag 87
>27083_eca-mir-199a:mirbase
Length = 61
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcagga 27
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggt 66
|||||||||||||||||||||||
Sbjct: 37 tgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcagga 27
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggt 66
|||||||||||||||||||||||
Sbjct: 37 tgtacagtagtctgcacattggt 59
>27582_lla-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>27623_sla-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>28231_mne-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 10 gtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattggttag 69
||||| |||||| |||||||||| ||| ||| ||||||||| ||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcagga--ctcccaaattgtacagtattctgcacattggttag 88
Query: 70 gc 71
||
Sbjct: 89 gc 90
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 10 gtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattggttag 69
||||| |||||| |||||||||| ||| ||| ||||||||| ||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcagga--ctcccaaattgtacagtattctgcacattggttag 88
Query: 70 gc 71
||
Sbjct: 89 gc 90
>31527_oan-mir-199:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>32786_rno-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>32787_rno-mir-199a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcagga 57
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 67 tgtacagtagtctgcacattggttag 92
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttcagga 32
|||||||||||||||||||||||||||
Sbjct: 9 cccagtgttcagactacctgttcagga 35
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 45 tgtacagtagtctgcacattggttag 70
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 gtgtacagtagtctgcacattggttag 69
|||||||||||||||||||||||||||
Sbjct: 49 gtgtacagtagtctgcacattggttag 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 acccagtgttcagactacctgttca 29
|||||||||||||||||||||||||
Sbjct: 13 acccagtgttcagactacctgttca 37
>25518_pma-mir-199b:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttag 73
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 ccagtgttcagactacctgttcagga 32
||||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagga 26
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||
Sbjct: 36 tgtacagtagtctgcacattggtt 59
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttca 29
||||||||||||||||||||||||
Sbjct: 16 cccagtgttcagactacctgttca 39
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttca 29
||||||||||||||||||||||||
Sbjct: 17 cccagtgttcagactacctgttca 40
>33277_bta-mir-199c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 gtgtacagtagtctgcacattgg 65
|||||||||||||||||||||||
Sbjct: 43 gtgtacagtagtctgcacattgg 65
>24847_cin-mir-199:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 acagtagtctgcacattgg 65
|||||||||||||||||||
Sbjct: 66 acagtagtctgcacattgg 84
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 cccagtgttcagactacctgttc 28
||||||||||||||||| |||||
Sbjct: 31 cccagtgttcagactacgtgttc 53
