miRNEST 2.0, an integrative microRNA resource :: BLAST
>30899_ppy-mir-203:mirbase
Length = 110
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 5 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 64
Query: 65 gtgaaatgtttaggaccactagacccggcgggcacggcgacagcga 110
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgaaatgtttaggaccactagacccggcgggcacggcgacagcga 110
>28522_hsa-mir-203:mirbase
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 105/106 (99%)
Strand = Plus / Plus
Query: 5 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 64
Query: 65 gtgaaatgtttaggaccactagacccggcgggcacggcgacagcga 110
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 65 gtgaaatgtttaggaccactagacccggcgggcgcggcgacagcga 110
>30281_ptr-mir-203:mirbase
Length = 109
Score = 194 bits (98), Expect = 9e-51
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 5 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggggactcgcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaatt 63
Query: 65 gtgaaatgtttaggaccactagacccggcgggcacggcgacagcga 110
|||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 64 gtgaaatgtttaggaccactagactcggcgggcgcggcgacagcga 109
>29377_hsa-mir-3545:mirbase
Length = 86
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 14 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 27
Query: 74 ttaggaccactagacccggcgggc 97
||||||||||||||||||||||||
Sbjct: 26 ttaggaccactagacccggcgggc 3
>29378_hsa-mir-3545:mirbase
Length = 86
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 14 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 27
Query: 74 ttaggaccactagacccggcgggc 97
||||||||||||||||||||||||
Sbjct: 26 ttaggaccactagacccggcgggc 3
>26763_cfa-mir-203:mirbase
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 14 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcgcgctgggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgt 64
Query: 74 ttaggaccactagacccggcgggcacggcg 103
||||||||||||| |||||||||| |||||
Sbjct: 65 ttaggaccactagccccggcgggcccggcg 94
>32793_rno-mir-203:mirbase
Length = 97
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 22 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 68
Query: 82 actagacccggcgggcacggc 102
||||||||||||| |||||||
Sbjct: 69 actagacccggcgcgcacggc 89
>33031_rno-mir-3545:mirbase
Length = 115
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 22 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 34
Query: 82 actagacccggcgggcacggc 102
||||||||||||| |||||||
Sbjct: 33 actagacccggcgcgcacggc 13
>33032_rno-mir-3545:mirbase
Length = 115
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 22 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 34
Query: 82 actagacccggcgggcacggc 102
||||||||||||| |||||||
Sbjct: 33 actagacccggcgcgcacggc 13
>31929_mmu-mir-203:mirbase
Length = 76
Score = 127 bits (64), Expect = 2e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 22 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 81
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 ggtccagtggttcttgacagttcaacagttctgtagcacaattgtgaaatgtttaggacc 64
Query: 82 actagacccggc 93
||||||||||||
Sbjct: 65 actagacccggc 76
>26502_tgu-mir-203:mirbase
Length = 132
Score = 95.6 bits (48), Expect = 6e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 26 cagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccacta 85
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 62 cagtggttcttaacagttcaacagttctctagcataattgtgaaatgtttaggaccactt 121
Query: 86 gacc 89
||||
Sbjct: 122 gacc 125
>25824_xtr-mir-203:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 1e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 27 agtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccact 84
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 9 agtggttcttaacagttcaacagttctctatcgaaattgtgaaatgtttaggaccact 66
>25994_gga-mir-203:mirbase
Length = 98
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 26 cagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccacta 85
|||||||||||||||||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 17 cagtggttcttaacagttcaacagttctctatcataattgtgaaatgtttaggaccactt 76
Query: 86 gacc 89
||||
Sbjct: 77 gacc 80
>27421_mdo-mir-203:mirbase
Length = 81
Score = 85.7 bits (43), Expect = 6e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 22 ggtccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggacc 81
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 10 ggtccagtggttcttaacagttcaacagttctgtgtagagattgtgaaatgtttaggacc 69
Query: 82 act 84
|||
Sbjct: 70 act 72
>34359_dre-mir-203a:mirbase
Length = 96
Score = 79.8 bits (40), Expect = 4e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 26 cagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccacta 85
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 31 cagtggttcttaacagttcaacagttctatctcaaaattgtgaaatgtttaggaccactt 90
Query: 86 gacc 89
||||
Sbjct: 91 gacc 94
>25520_pma-mir-203a:mirbase
Length = 91
Score = 71.9 bits (36), Expect = 9e-14
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 25 ccagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccact 84
||||||||||| | ||||||||||||||| | | | ||||||||||||||||||||||||
Sbjct: 15 ccagtggttctcatcagttcaacagttctttggagaaattgtgaaatgtttaggaccact 74
>25521_pma-mir-203b:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 4e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 26 cagtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccact 84
|||||||||| | ||||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 16 cagtggttctaaccagttcaacagttctctactgaaattgtgaaatgtttaggaccact 74
>34631_fru-mir-203:mirbase
Length = 74
Score = 61.9 bits (31), Expect = 9e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 27 agtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccactag 86
||||||||| ||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 8 agtggttctcaacagttcaacagttctatgagaaaattgtgaaatgtttaggaccacttg 67
Query: 87 acc 89
|||
Sbjct: 68 acc 70
>34778_tni-mir-203:mirbase
Length = 74
Score = 61.9 bits (31), Expect = 9e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 27 agtggttcttaacagttcaacagttctgtagcgcaattgtgaaatgtttaggaccactag 86
||||||||| ||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 8 agtggttctcaacagttcaacagttctttgagaaaattgtgaaatgtttaggaccacttg 67
Query: 87 acc 89
|||
Sbjct: 68 acc 70
>34360_dre-mir-203b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 27 agtggttcttaacagttcaacagttct 53
||||||||| |||||||||||||||||
Sbjct: 14 agtggttctcaacagttcaacagttct 40
