miRNEST 2.0, an integrative microRNA resource :: BLAST
>28771_hsa-mir-520g:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaag 60
|||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tcccatgctgtgaccctctagaggaagcactttctgtttgttgtctgagaaaaaacaaag 60
Query: 61 tgcttcccttcagagtgt 78
|||||||||| |||||||
Sbjct: 61 tgcttccctttagagtgt 78
>28772_hsa-mir-520h:mirbase
Length = 88
Score = 119 bits (60), Expect = 4e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaag 60
|||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tcccatgctgtgaccctctagaggaagcactttctgtttgttgtctgagaaaaaacaaag 60
Query: 61 tgcttcccttcagagt 76
|||||||||| |||||
Sbjct: 61 tgcttccctttagagt 76
>30453_ptr-mir-520g:mirbase
Length = 89
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 2 cccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaagt 61
||||||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 1 cccatgctgtgaccctctagaggacgcactttctgtttgttgtctgagaaaaaacaaagt 60
Query: 62 gcttcccttcagagtgt 78
||||||||| |||||||
Sbjct: 61 gcttccctttagagtgt 77
>30454_ptr-mir-520h:mirbase
Length = 89
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 2 cccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaagt 61
|||| |||||| |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 1 cccacgctgtgaccctctagaggaagcactttctgtttgttgtctgagaaaaaacaaagt 60
Query: 62 gcttcccttcagagtgt 78
||||||||| |||||||
Sbjct: 61 gcttccctttagagtgt 77
>31110_ppy-mir-520g:mirbase
Length = 90
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaag 60
||||| |||||| |||||||||| ||||||||||||||||||||| ||| |||||||||
Sbjct: 1 tcccacgctgtgaccctctagaggaagcactttctgtttgttgtcggagagaaaacaaag 60
Query: 61 tgcttcccttcagagtgt 78
|||||||||| |||||||
Sbjct: 61 tgcttccctttagagtgt 78
>31111_ppy-mir-520h:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctagagaaagcactttctgtttgttgtctgaggaaaaacaaag 60
||||| |||||| |||||||||| ||||||||||||||||||||| ||| |||||||||
Sbjct: 1 tcccacgctgtgaccctctagaggaagcactttctgtttgttgtccgagagaaaacaaag 60
Query: 61 tgcttcccttcagagtgt 78
|||||||||| |||||||
Sbjct: 61 tgcttccctttagagtgt 78
>27978_mml-mir-519d:mirbase
Length = 91
Score = 77.8 bits (39), Expect = 1e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 25 aagcactttctgtttgttgtctgaggaaaaacaaagtgcttcccttcagagtgtg 79
||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 26 aagcactttctgtttgttgtctgagagaaaacaaagtgcttccttttagagtgtg 80
>28750_hsa-mir-518d:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctaga-gaaagcactttctgtt 38
|||||||||||| ||||||||| | ||||||||||||||
Sbjct: 1 tcccatgctgtgaccctctagagggaagcactttctgtt 39
>28751_hsa-mir-518d:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 tcccatgctgtggccctctaga-gaaagcactttctgtt 38
|||||||||||| ||||||||| | ||||||||||||||
Sbjct: 1 tcccatgctgtgaccctctagagggaagcactttctgtt 39
>30439_ptr-mir-518d:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 2 cccatgctgtggccctctaga-gaaagcactttctgtt 38
||||||||||| ||||||||| | ||||||||||||||
Sbjct: 1 cccatgctgtgaccctctagagggaagcactttctgtt 38
>27979_mml-mir-520a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
|||||||||| | |||| ||||||||||||||
Sbjct: 35 tgttgtctgaaggaaaagaaagtgcttccctt 66
>28762_hsa-mir-520a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
||||||||||| |||| ||||||||||||||
Sbjct: 35 tgttgtctgagagaaaagaaagtgcttccctt 66
>28763_hsa-mir-520a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
||||||||||| |||| ||||||||||||||
Sbjct: 35 tgttgtctgagagaaaagaaagtgcttccctt 66
>30447_ptr-mir-520a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
||||||||||| |||| ||||||||||||||
Sbjct: 34 tgttgtctgagagaaaagaaagtgcttccctt 65
>31101_ppy-mir-520a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
||||||||||| |||| ||||||||||||||
Sbjct: 35 tgttgtctgagagaaaagaaagtgcttccctt 66
>31102_ppy-mir-520a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 39 tgttgtctgaggaaaaacaaagtgcttccctt 70
||||||||||| |||| ||||||||||||||
Sbjct: 35 tgttgtctgagagaaaagaaagtgcttccctt 66
