miRNEST 2.0, an integrative microRNA resource :: BLAST
>31133_ppy-mir-549:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 94/96 (97%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcagatca- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcagatcag 60
Query: 60 tgacaattatggatgagctcttaatatatcccaggc 95
|||||| |||||||||||||||||||||||||||||
Sbjct: 61 tgacaactatggatgagctcttaatatatcccaggc 96
Score = 71.9 bits (36), Expect = 8e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 18 atatattgagagctcatccatagttgtcactg-tctcagatcatgacaattatggatgag 76
||||||| |||||||||||||||||||||||| ||| ||| |||||| ||||||||||
Sbjct: 89 atatattaagagctcatccatagttgtcactgatctgagacagtgacaactatggatgag 30
Query: 77 ctcttaatatat 88
|||| |||||||
Sbjct: 29 ctctcaatatat 18
>30488_ptr-mir-549:mirbase
Length = 95
Score = 165 bits (83), Expect = 7e-42
Identities = 93/95 (97%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcagatca- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcagatcag 60
Query: 60 tgacaattatggatgagctcttaatatatcccagg 94
|||||| ||||||||||||||||||||||||||||
Sbjct: 61 tgacaactatggatgagctcttaatatatcccagg 95
Score = 71.9 bits (36), Expect = 8e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 18 atatattgagagctcatccatagttgtcactg-tctcagatcatgacaattatggatgag 76
||||||| |||||||||||||||||||||||| ||| ||| |||||| ||||||||||
Sbjct: 89 atatattaagagctcatccatagttgtcactgatctgagacagtgacaactatggatgag 30
Query: 77 ctcttaatatat 88
|||| |||||||
Sbjct: 29 ctctcaatatat 18
>28858_hsa-mir-549:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 93/96 (96%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcagatca- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 agacatgcaactcaagaatatattgagagctcatccatagttgtcactgtctcaaatcag 60
Query: 60 tgacaattatggatgagctcttaatatatcccaggc 95
|||||| |||||||||||||||||||||||||||||
Sbjct: 61 tgacaactatggatgagctcttaatatatcccaggc 96
Score = 63.9 bits (32), Expect = 2e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 18 atatattgagagctcatccatagttgtcactg-tctcagatcatgacaattatggatgag 76
||||||| |||||||||||||||||||||||| | | ||| |||||| ||||||||||
Sbjct: 89 atatattaagagctcatccatagttgtcactgatttgagacagtgacaactatggatgag 30
Query: 77 ctcttaatatat 88
|||| |||||||
Sbjct: 29 ctctcaatatat 18
