miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28010_mml-mir-556:mirbase
Length = 82
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
Query: 61 caattagctgatc 73
|||||||||||||
Sbjct: 61 caattagctgatc 73
>31139_ppy-mir-556:mirbase
Length = 95
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
|||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatagtgataagaaagatgagctcattgtaatatgagcttcatttatgcatttcatatta 60
Query: 61 caattagct 69
|||||||||
Sbjct: 61 caattagct 69
>31140_ppy-mir-556:mirbase
Length = 95
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
|||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatagtgataagaaagatgagctcattgtaatatgagcttcatttatgcatttcatatta 60
Query: 61 caattagct 69
|||||||||
Sbjct: 61 caattagct 69
>28869_hsa-mir-556:mirbase
Length = 95
Score = 105 bits (53), Expect = 5e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gatagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatatta 60
Query: 61 caattagct 69
| |||||||
Sbjct: 61 ccattagct 69
>28870_hsa-mir-556:mirbase
Length = 95
Score = 105 bits (53), Expect = 5e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 gatagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatatta 60
||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gatagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatatta 60
Query: 61 caattagct 69
| |||||||
Sbjct: 61 ccattagct 69
>30498_ptr-mir-556:mirbase
Length = 94
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 2 atagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatattac 61
|||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
Query: 62 aattagct 69
|||||||
Sbjct: 61 cattagct 68
