miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31151_ppy-mir-571:mirbase
Length = 94
Score = 91.7 bits (46), Expect = 1e-19
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 17 cctcagtaaggccaacctccatgcaccattttcttgtctgtagccatgtctgtgggctgt 76
|||||||||| |||| ||| || |||||| |||||||||||||||||||||||||| |
Sbjct: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctgtgggctct 60
Query: 77 ggagttggccacctgggtgagggcctgctt 106
|||||||||| ||| ||||||||||||||
Sbjct: 61 tgagttggccatctgagtgagggcctgctt 90
>28883_hsa-mir-571:mirbase
Length = 96
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 17 cctcagtaaggccaacctccatgcaccattttcttgtctgtagccatgtctgtgggctgt 76
|||||||||| |||| ||| || |||||| ||||||||||||||||||| |||||| |
Sbjct: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
Query: 77 ggagttggccacctgggtgagggcctgctt 106
|||||||||| ||| ||||||||||||||
Sbjct: 61 tgagttggccatctgagtgagggcctgctt 90
>30510_ptr-mir-571:mirbase
Length = 92
Score = 75.8 bits (38), Expect = 6e-15
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 17 cctcagtaaggccaacctccatgcaccattttcttgtctgtagccatgtctgtgggctgt 76
|||||||||| |||| ||| || |||||| ||||||||||||||||||| |||||| |
Sbjct: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
Query: 77 ggagttggccacctgggtgagggcctgctt 106
|||||||||| ||| | ||||||||||||
Sbjct: 61 tgagttggccatctgagcgagggcctgctt 90
