miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28024_mml-mir-576:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
Query: 61 tggaaaaattggaatcctcattggattggttataa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaaaaattggaatcctcattggattggttataa 95
Score = 60.0 bits (30), Expect = 3e-10
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 3 caatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatgtg 62
||||||| ||||||||| ||||| |||||||||||| || | | || ||||||||||
Sbjct: 88 caatccaatgaggattccaatttttccacatctttgccaaaacttattaccaaagatgtg 29
Query: 63 gaaaaattggaatcctcattggattg 88
|| ||||| ||||||||| |||||||
Sbjct: 28 gagaaattagaatcctcactggattg 3
>31154_ppy-mir-576:mirbase
Length = 98
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tacaatccaatgaggattctaatttctccatgtctttggtaataagttttggcaaagatg 60
Query: 61 tggaaaaattggaatcctcattggattggttataa 95
|||||||||||||||||||||| ||||||||||||
Sbjct: 61 tggaaaaattggaatcctcattcgattggttataa 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tgaggattctaatttctccacatctttggtaataagttttggcaaagatgtggaaaaatt 70
||||||||| ||||| |||||||||||| || | | || |||||| |||| |||||
Sbjct: 80 tgaggattccaatttttccacatctttgccaaaacttattaccaaagacatggagaaatt 21
Query: 71 ggaatcctcattggattg 88
|||||||||||||||||
Sbjct: 20 agaatcctcattggattg 3
>31155_ppy-mir-576:mirbase
Length = 98
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tacaatccaatgaggattctaatttctccatgtctttggtaataagttttggcaaagatg 60
Query: 61 tggaaaaattggaatcctcattggattggttataa 95
|||||||||||||||||||||| ||||||||||||
Sbjct: 61 tggaaaaattggaatcctcattcgattggttataa 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tgaggattctaatttctccacatctttggtaataagttttggcaaagatgtggaaaaatt 70
||||||||| ||||| |||||||||||| || | | || |||||| |||| |||||
Sbjct: 80 tgaggattccaatttttccacatctttgccaaaacttattaccaaagacatggagaaatt 21
Query: 71 ggaatcctcattggattg 88
|||||||||||||||||
Sbjct: 20 agaatcctcattggattg 3
>30513_ptr-mir-576:mirbase
Length = 97
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 2 acaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 61
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
Query: 62 ggaaaaattggaatcctcattggattggttataa 95
||||||||||||||||||||| |||||||||||
Sbjct: 61 ggaaaaattggaatcctcattcaattggttataa 94
Score = 52.0 bits (26), Expect = 7e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 11 tgaggattctaatttctccacatctttggtaataagttttggcaaagatgtggaaaaatt 70
||||||||| ||||| |||||||||||| || | | || |||||||||||| |||||
Sbjct: 79 tgaggattccaatttttccacatctttgccaaaacttattaccaaagatgtggagaaatt 20
Query: 71 ggaatcctcattggattg 88
|||||||| ||||||||
Sbjct: 19 agaatcctcgttggattg 2
>28889_hsa-mir-576:mirbase
Length = 98
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 1 tacaatccaacgaggattctaatttctccacgtctttggtaataaggtttggcaaagatg 60
Query: 61 tggaaaaattggaatcctcattggattggttataa 95
|||||||||||||||||||||| ||||||||||||
Sbjct: 61 tggaaaaattggaatcctcattcgattggttataa 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 11 tgaggattctaatttctccacatctttg 38
||||||||| ||||| ||||||||||||
Sbjct: 80 tgaggattccaatttttccacatctttg 53
>28890_hsa-mir-576:mirbase
Length = 98
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 1 tacaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatg 60
||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 1 tacaatccaacgaggattctaatttctccacgtctttggtaataaggtttggcaaagatg 60
Query: 61 tggaaaaattggaatcctcattggattggttataa 95
|||||||||||||||||||||| ||||||||||||
Sbjct: 61 tggaaaaattggaatcctcattcgattggttataa 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 11 tgaggattctaatttctccacatctttg 38
||||||||| ||||| ||||||||||||
Sbjct: 80 tgaggattccaatttttccacatctttg 53
