miRNEST 2.0, an integrative microRNA resource :: BLAST
>28893_hsa-mir-579:mirbase
Length = 98
Score = 159 bits (80), Expect = 5e-40
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 1 catattaggttaatgcaaaagtaatcgcggtttgtgccaaatggcgatttgaattaataa 60
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1 catattaggttaatgcaaaagtaatcgcggtttgtgccagatgacgatttgaattaataa 60
Query: 61 attcatttggtacaaaccgcgattacttttgcatca 96
|||||||||||| |||||||||||| ||||||||||
Sbjct: 61 attcatttggtataaaccgcgattatttttgcatca 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 tcatttggtacaaaccgcgattacttttgcat 94
|||| ||| |||||||||||||||||||||||
Sbjct: 44 tcatctggcacaaaccgcgattacttttgcat 13
>30515_ptr-mir-579:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 2 atattaggttaatgcaaaagtaatcgcggtttgtgccaaatggcgatttgaattaataaa 61
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1 atattaggttaatgcaaaagtaatcgcggtttgtgccagatgacgatttgaattaataaa 60
Query: 62 ttcatttggtacaaaccgcgattacttttgcatca 96
||||||||||| |||||||||||| ||||||||||
Sbjct: 61 ttcatttggtataaaccgcgattatttttgcatca 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 tcatttggtacaaaccgcgattacttttgcat 94
|||| ||| |||||||||||||||||||||||
Sbjct: 43 tcatctggcacaaaccgcgattacttttgcat 12
>31158_ppy-mir-579:mirbase
Length = 98
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 1 catattaggttaatgcaaaagtaatcgcggtttgtgccaaatggcgatttgaattaataa 60
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 1 catattaggttaatgcaaaagtaatcgcggtttgtgccagatgacgatttgaattagtaa 60
Query: 61 attcatttggtacaaaccgcgattacttttgcatca 96
|||||||||||| |||||||||||| ||||||||||
Sbjct: 61 attcatttggtataaaccgcgattatttttgcatca 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 tcatttggtacaaaccgcgattacttttgcat 94
|||| ||| |||||||||||||||||||||||
Sbjct: 44 tcatctggcacaaaccgcgattacttttgcat 13
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggttt 33
||||||||| ||||||||||||||||||||
Sbjct: 2 tattaggttggtgcaaaagtaatcgcggttt 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 74 aaaccgcgattacttttgca 93
||||||||||||||||||||
Sbjct: 32 aaaccgcgattacttttgca 13
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggttt 33
||||||||| ||||||||||||||||||||
Sbjct: 15 tattaggttggtgcaaaagtaatcgcggttt 45
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 74 aaaccgcgattacttttgca 93
||||||||||||||||||||
Sbjct: 45 aaaccgcgattacttttgca 26
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggttt 33
||||||||| ||||||||||||||||||||
Sbjct: 3 tattaggttggtgcaaaagtaatcgcggttt 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 74 aaaccgcgattacttttgca 93
||||||||||||||||||||
Sbjct: 33 aaaccgcgattacttttgca 14
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggtttgtgcca 39
||||||||| |||||||||||| ||||||| |||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgcca 47
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggtttgtgcca 39
||||||||| |||||||||||| ||||||| |||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgcca 47
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 3 tattaggttaatgcaaaagtaatcgcggtttgtgcca 39
||||||||| |||||||||||| ||||||| |||||
Sbjct: 87 tattaggttggtgcaaaagtaattgcggtttttgcca 51
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 3 tattaggttaatgcaaaagtaatcgcggtttgtgcca 39
||||||||| |||||||||||| ||||||| |||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgcca 47
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 74 aaaccgcgattacttttgca 93
||||||||||||||||||||
Sbjct: 37 aaaccgcgattacttttgca 18
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 tgcaaaagtaatcgcggttt 33
||||||||||||||||||||
Sbjct: 18 tgcaaaagtaatcgcggttt 37
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 74 aaaccgcgattacttttgca 93
||||||||||||||||||||
Sbjct: 37 aaaccgcgattacttttgca 18
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 tgcaaaagtaatcgcggttt 33
||||||||||||||||||||
Sbjct: 18 tgcaaaagtaatcgcggttt 37
