miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28031_mml-mir-582:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
>28896_hsa-mir-582:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
>28897_hsa-mir-582:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
>31161_ppy-mir-582:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
>31162_ppy-mir-582:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
>30518_ptr-mir-582:mirbase
Length = 97
Score = 184 bits (93), Expect = 8e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 2 tctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggtt 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggtt 60
Query: 62 gaacaactgaacccaaagggtgcaaagtagaaacatt 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacaactgaacccaaagggtgcaaagtagaaacatt 97
>33423_bta-mir-582:mirbase
Length = 98
Score = 147 bits (74), Expect = 2e-36
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 atctgtgctctttgattacagttgttcaaccagttactaatctacctaattgtaactggt 60
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 atctgttctctttggttacagttgttcaaccagttactaatctacctaattgtaaccagt 60
Query: 61 tgaacaactgaacccaaagggtgcaaagtagaaacatt 98
||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tgaacaactgaacccaaagggtgcaaagtgaaaacatt 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 gtaactggttgaacaactgaacccaaag 79
||||||||||||||||||| | ||||||
Sbjct: 37 gtaactggttgaacaactgtaaccaaag 10
>26885_cfa-mir-582:mirbase
Length = 81
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
Query: 68 ctgaacccaaagggtgcaaa 87
||||||||||||||||||||
Sbjct: 62 ctgaacccaaagggtgcaaa 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 gtaactggttgaacaactgaacccaaag 79
||||||||||||||||||| | ||||||
Sbjct: 31 gtaactggttgaacaactgtaaccaaag 4
>32217_mmu-mir-582:mirbase
Length = 81
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 2 ctctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaacaa 61
Query: 68 ctgaacccaaagggtgcaaa 87
||||||||||||||||||||
Sbjct: 62 ctgaacccaaagggtgcaaa 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 gtaactggttgaacaactgaacccaaag 79
||||||||||||||||||| | ||||||
Sbjct: 31 gtaactggttgaacaactgtatccaaag 4
>32218_mmu-mir-582:mirbase
Length = 81
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 2 ctctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaacaa 61
Query: 68 ctgaacccaaagggtgcaaa 87
||||||||||||||||||||
Sbjct: 62 ctgaacccaaagggtgcaaa 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 gtaactggttgaacaactgaacccaaag 79
||||||||||||||||||| | ||||||
Sbjct: 31 gtaactggttgaacaactgtatccaaag 4
>32959_rno-mir-582:mirbase
Length = 81
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 2 ctctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaacaa 61
Query: 68 ctgaacccaaagggtgcaaa 87
||||||||||||||||||||
Sbjct: 62 ctgaacccaaagggtgcaaa 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 gtaactggttgaacaactgaacccaaag 79
||||||||||||||||||| | ||||||
Sbjct: 31 gtaactggttgaacaactgtatccaaag 4
>27236_eca-mir-582:mirbase
Length = 68
Score = 111 bits (56), Expect = 9e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 11 tttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaactg 70
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1 tttggttacagttgttcaaccagttactaatctaactaattgtaaccggttgaacaactg 60
Query: 71 aacccaaa 78
||||||||
Sbjct: 61 aacccaaa 68
>27237_eca-mir-582:mirbase
Length = 68
Score = 111 bits (56), Expect = 9e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 11 tttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaactg 70
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1 tttggttacagttgttcaaccagttactaatctaactaattgtaaccggttgaacaactg 60
Query: 71 aacccaaa 78
||||||||
Sbjct: 61 aacccaaa 68
