miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31163_ppy-mir-583:mirbase
          Length = 75

 Score =  133 bits (67), Expect = 2e-32
 Identities = 73/75 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  aactcgcacatttaccaaagaggaaggtcccagtactgcagggatcttagcagtactggg 60
          ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1  aactcacacatttaccaaagaggaaggtcccagtactccagggatcttagcagtactggg 60

                         
Query: 61 acctacctctttggt 75
          |||||||||||||||
Sbjct: 61 acctacctctttggt 75



 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                      
Query: 14 accaaagaggaaggtcccagtactgcagggatcttagcagtactgggacctacctctttg 73
          |||||||||| |||||||||||||||   ||||   | ||||||||||||| ||||||||
Sbjct: 75 accaaagaggtaggtcccagtactgctaagatccctggagtactgggaccttcctctttg 16

            
Query: 74 gt 75
          ||
Sbjct: 15 gt 14




>28898_hsa-mir-583:mirbase
          Length = 75

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  aactcgcacatttaccaaagaggaaggtcccagtactgcagggatcttagcagtactggg 60
          ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1  aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60

                         
Query: 61 acctacctctttggt 75
          |||||||||||||||
Sbjct: 61 acctacctctttggt 75



 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                      
Query: 14 accaaagaggaaggtcccagtactgcagggatcttagcagtactgggacctacctctttg 73
          |||||||||| |||||||||||||||   ||||   |||||| |||||||| ||||||||
Sbjct: 75 accaaagaggtaggtcccagtactgctaagatccctgcagtaatgggaccttcctctttg 16

            
Query: 74 gt 75
          ||
Sbjct: 15 gt 14




>30519_ptr-mir-583:mirbase
          Length = 74

 Score =  123 bits (62), Expect = 2e-29
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  aactcgcacatttaccaaagaggaaggtcccagtactgcagggatcttagcagtactggg 60
          ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1  aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60

                        
Query: 61 acctacctctttgg 74
          ||||||||||||||
Sbjct: 61 acctacctctttgg 74



 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                      
Query: 15 ccaaagaggaaggtcccagtactgcagggatcttagcagtactgggacctacctctttgg 74
          ||||||||| |||||||||||||||   ||||   |||||| |||||||| |||||||||
Sbjct: 74 ccaaagaggtaggtcccagtactgctaagatccctgcagtaatgggaccttcctctttgg 15

           
Query: 75 t 75
          |
Sbjct: 14 t 14