miRNEST 2.0, an integrative microRNA resource :: BLAST
>40025_ath-MIR162b:mirbase
Length = 111
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 46
>39813_aly-MIR162b:mirbase
Length = 184
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 84
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 74 aagcatgaatcgatcgataaacctctgcatccagtgctt 112
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 100 aagcatgaatcgatcgataaacctctgcatccagcgctt 138
>40342_rco-MIR162:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 76 gcatgaatcgatcgataaacctctgcatccagtgctt 112
|||||||||||||||||||||||||||||||| ||||
Sbjct: 65 gcatgaatcgatcgataaacctctgcatccagcgctt 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatc 26
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 agtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtgaa 59
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 74 aagcatgaatcgatcgataaacctctgcatccag 107
|||||||||| |||||||||||||||||||||||
Sbjct: 76 aagcatgaatagatcgataaacctctgcatccag 109
>41220_csi-MIR162:mirbase
Length = 201
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 151 catgaatcgatcgataaacctctgcatccag 181
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatca 34
||||||| ||||||||||||||||||||||||
Sbjct: 81 tgaagtcactggaggcagcggttcatcgatca 112
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccag 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatc 46
>40437_gma-MIR162:mirbase
Length = 102
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatc 33
||||||| ||||| |||||||||||||||||
Sbjct: 2 tgaagtcactggatgcagcggttcatcgatc 32
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 70 catgaatcgatcgataaacctctgcatccag 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 aagtcgctggaggcagcggttcatcgatc 33
||||| |||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatc 35
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 74 aagcatgaatcgatcgataaacctctgcatccag 107
|||||||||| |||||||||||||||||||||||
Sbjct: 123 aagcatgaatagatcgataaacctctgcatccag 156
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 agtcgctggaggcagcggttcatcgatc 33
||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatc 90
>41929_osa-MIR162a:mirbase
Length = 171
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccagt 108
|||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccagt 164
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccagtgcttc 113
|||||| |||||||||||||||||||||||| |||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41090_tcc-MIR162:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
||||| |||||||||||||||||||||||||
Sbjct: 81 catgattcgatcgataaacctctgcatccag 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatc 43
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
||||||||| |||||||||||||||||||||
Sbjct: 77 catgaatcggtcgataaacctctgcatccag 107
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatcc 105
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41578_vvi-MIR162:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatc 33
||||||| ||||| |||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatc 31
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
