miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30650_ptr-mir-1227:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcaccgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 gctgaccccgtgccatcctcttcccca 87
||||||||||||| ||| |||||||
Sbjct: 61 tttgaccccgtgccacccttttcccca 87
>29074_hsa-mir-1227:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcaccgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcgggca 60
Query: 61 gctgaccccgtgccatcctcttccccag 88
||||||||||||| ||| ||||||||
Sbjct: 61 tttgaccccgtgccacccttttccccag 88
>31298_ppy-mir-1227:mirbase
Length = 88
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gtggggccaggcggtggtgggcaccgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcagtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 gctgaccccgtgccatcctcttccccag 88
|||||| | ||||| ||| ||||||||
Sbjct: 61 tctgaccacatgccacccttttccccag 88
