miRNEST 2.0, an integrative microRNA resource :: BLAST
>26968_eca-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>26969_eca-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>27492_age-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>27552_lla-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>27675_mml-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttgtgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>28274_ggo-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>28385_hsa-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>28386_hsa-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>30061_ppa-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>30171_ptr-mir-28:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>30776_ppy-mir-28:mirbase
Length = 86
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttacctttctgattttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>33157_bta-mir-28:mirbase
Length = 86
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctgactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||| ||||||||||||||||||||||
Sbjct: 61 ttgagagctcctggagggcaggcact 86
>27600_sla-mir-28:mirbase
Length = 86
Score = 147 bits (74), Expect = 1e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacagtctattgagttgcctttctaactttcccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
|||| |||||||||||||||||||||
Sbjct: 61 ttgtaagctcctggagggcaggcact 86
>33933_ssc-mir-28:mirbase
Length = 86
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacactctattgagttgcctttctgtcttccccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>33934_ssc-mir-28:mirbase
Length = 86
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtctattgagtttcctttctgactttcccactaga 60
||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||
Sbjct: 1 ggtccttgccctcaaggagctcacactctattgagttgcctttctgtcttccccactaga 60
Query: 61 ttgtgagctcctggagggcaggcact 86
||||||||||||||||||||||||||
Sbjct: 61 ttgtgagctcctggagggcaggcact 86
>31799_mmu-mir-28:mirbase
Length = 86
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 12 tcaaggagctcacagtctattgagtttcctttctgactttcccactagattgtgagctcc 71
|||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |
Sbjct: 12 tcaaggagctcacagtctattgagttgcctttctgattctcccactagattgtgagctgc 71
Query: 72 tggagggcaggcact 86
|||||||||||||||
Sbjct: 72 tggagggcaggcact 86
>26647_cfa-mir-28:mirbase
Length = 62
Score = 115 bits (58), Expect = 5e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 14 aaggagctcacagtctattgagtttcctttctgactttcccactagattgtgagctcctg 73
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggagctcacagtctattgagttgcctttctgactttcccactagattgtgagctcctg 60
Query: 74 ga 75
||
Sbjct: 61 ga 62
>32682_rno-mir-28:mirbase
Length = 86
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 13 caaggagctcacagtctattgagtttcctttctgactttcccactagattgtgagctcct 72
||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||||||
Sbjct: 13 caaggagctcacagtctattgagttccttttctgattctcccactagattgtgagctcct 72
Query: 73 ggagggcaggcact 86
||||||||||||||
Sbjct: 73 ggagggcaggcact 86
>27353_mdo-mir-28:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 ggtccttgccctcaaggagctcacagtc 28
||||||||||||||||||||||||||||
Sbjct: 39 ggtccttgccctcaaggagctcacagtc 66
>27399_mdo-mir-151:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||||||||||||||||||||
Sbjct: 40 tgccctcaaggagctcacagtcta 17
>27055_eca-mir-151:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 3 tgccctcgaggagctcacagtcta 26
>27760_mml-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>27761_mml-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>28475_hsa-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>28476_hsa-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>28477_hsa-mir-151b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 55 tgccctcgaggagctcacagtcta 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 56 ctagattgtgagctcctggagggcagg 82
||||| ||||||||||| |||||||||
Sbjct: 79 ctagactgtgagctcctcgagggcagg 53
>30246_ptr-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>30859_ppy-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>30860_ppy-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 6 tgccctcgaggagctcacagtcta 29
>31801_mmu-mir-28c:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 aggagctcacagtctattga 34
||||||||||||||||||||
Sbjct: 45 aggagctcacagtctattga 64
>31886_mmu-mir-151:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 3 tgccctcgaggagctcacagtcta 26
>31887_mmu-mir-151:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 3 tgccctcgaggagctcacagtcta 26
>32758_rno-mir-151:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 36 actagactgtgagctcctcgagggcagg 9
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 11 tgccctcgaggagctcacagtcta 34
>33084_rno-mir-3586:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 62 actagactgtgagctcctcgagggcagg 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 87 tgccctcgaggagctcacagtcta 64
>33085_rno-mir-3586:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 62 actagactgtgagctcctcgagggcagg 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 87 tgccctcgaggagctcacagtcta 64
>33238_bta-mir-151:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 3 tgccctcgaggagctcacagtcta 26
>34001_ssc-mir-151:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 32 actagactgtgagctcctcgagggcagg 5
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 7 tgccctcgaggagctcacagtcta 30
>34002_ssc-mir-151:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 55 actagattgtgagctcctggagggcagg 82
|||||| ||||||||||| |||||||||
Sbjct: 32 actagactgtgagctcctcgagggcagg 5
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 tgccctcaaggagctcacagtcta 30
||||||| ||||||||||||||||
Sbjct: 7 tgccctcgaggagctcacagtcta 30
