miRNEST 2.0, an integrative microRNA resource :: BLAST
>27803_mml-mir-206:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
Query: 61 aaggaagtgtgtggtttcggcaagtg 86
||||||||||||||||||||||||||
Sbjct: 61 aaggaagtgtgtggtttcggcaagtg 86
>28525_hsa-mir-206:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
Query: 61 aaggaagtgtgtggtttcggcaagtg 86
||||||||||||||||||||||||||
Sbjct: 61 aaggaagtgtgtggtttcggcaagtg 86
>30902_ppy-mir-206:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
Query: 61 aaggaagtgtgtggtttcggcaagtg 86
||||||||||||||||||||||||||
Sbjct: 61 aaggaagtgtgtggtttcggcaagtg 86
>30284_ptr-mir-206:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 2 gcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgta 60
Query: 62 aggaagtgtgtggtttcggcaagtg 86
|||||||||||||||||||||||||
Sbjct: 61 aggaagtgtgtggtttcggcaagtg 85
>33284_bta-mir-206:mirbase
Length = 86
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 tgcttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgt 60
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tgcttcccaaggccacatgcttctttatatccccatacggattactttgctatggaatgt 60
Query: 61 aaggaagtgtgtggtttcggc 81
|||||||||||||||||||||
Sbjct: 61 aaggaagtgtgtggtttcggc 81
>27092_eca-mir-206-2:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 10 aggccacatgcttctttatatccccatatggattactttgctatggaatgtaaggaagtg 69
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 aggccacatgcttctttatatccccatacggattactttgctatggaatgtaaggaagtg 60
Query: 70 tgtggtttc 78
|||||||||
Sbjct: 61 tgtggtttc 69
>31532_oan-mir-206:mirbase
Length = 122
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatggattactttgctatggaatgtaaggaagtgtgtgg 74
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 35 acatgcttctttatatccccatatggattacgctgctatggaatgtaaggaagtgtgtgg 94
Query: 75 tttcgg 80
||||||
Sbjct: 95 tttcgg 100
>34036_ssc-mir-206:mirbase
Length = 80
Score = 115 bits (58), Expect = 5e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 4 ttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgtaag 63
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1 ttcccgaggccacatgcttctttatatccccatacggattacttgactatggaatgtaag 60
Query: 64 gaagtgtgtg 73
||||||||||
Sbjct: 61 gaagtgtgtg 70
>25999_gga-mir-206:mirbase
Length = 76
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatggattactttgctatggaatgtaaggaagtgtgtgg 74
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7 acatgcttctttatatccccatatggattaggctgctatggaatgtaaggaagtgtgtgg 66
Query: 75 tttc 78
||||
Sbjct: 67 tttc 70
>26766_cfa-mir-206:mirbase
Length = 60
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatggattactttgctatggaatgtaaggaagtgtgtgg 74
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1 acatgcttctttatatccccatacggattacgttgctatggaatgtaaggaagtgtgtgg 60
>27424_mdo-mir-206:mirbase
Length = 76
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 9 gaggccacatgcttctttatatccccatatggattactttgctatggaatgtaaggaagt 68
||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 1 gaggcaacatgcttctttatatccccatatgaattatgctgctatggaatgtaaggaagt 60
Query: 69 gtgtggtttcgg 80
||||||||||||
Sbjct: 61 gtgtggtttcgg 72
>32796_rno-mir-206:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 5e-21
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 3 cttcccgaggccacatgcttctttatatccccatatggattactttgctatggaatgtaa 62
|||||| ||||||||||||||||||||||| |||| || ||| ||||||||||||||
Sbjct: 1 cttccccaggccacatgcttctttatatcctcatagatatcactgcgctatggaatgtaa 60
Query: 63 ggaagtgtgtggtttcggcaagtg 86
||||||||||||||| ||||||||
Sbjct: 61 ggaagtgtgtggttttggcaagtg 84
>25829_xtr-mir-206:mirbase
Length = 70
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 9 gaggccacatgcttctttatatccccatatggattactttgctatggaatgtaaggaagt 68
|||| ||||||||||||||||| |||||||| | ||| ||| ||||||||||||||||||
Sbjct: 1 gaggtcacatgcttctttatatacccatatgaactacattgttatggaatgtaaggaagt 60
Query: 69 gtgtgg 74
||||||
Sbjct: 61 gtgtgg 66
>31932_mmu-mir-206:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 ctatggaatgtaaggaagtgtgtggttt 77
||||||||||||||||||||||||||||
Sbjct: 43 ctatggaatgtaaggaagtgtgtggttt 70
>34364_dre-mir-206-1:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tatggaatgtaaggaagtgtgtggtttc 78
||||||||||||||||||||||||||||
Sbjct: 57 tatggaatgtaaggaagtgtgtggtttc 84
>34365_dre-mir-206-2:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 ctatggaatgtaaggaagtgtgtgg 74
|||||||||||||||||||||||||
Sbjct: 61 ctatggaatgtaaggaagtgtgtgg 85
>32648_rno-mir-1:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 tgctatggaatgtaaggaagtgtgt 72
||||||||||||||| |||||||||
Sbjct: 49 tgctatggaatgtaaagaagtgtgt 73
>33064_rno-mir-3571:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 48 tgctatggaatgtaaggaagtgtgt 72
||||||||||||||| |||||||||
Sbjct: 50 tgctatggaatgtaaagaagtgtgt 26
>26937_eca-mir-1-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatgga 41
|||| ||||||||||| ||||||||||
Sbjct: 10 acatacttctttatatgcccatatgga 36
>27640_mml-mir-1-1:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatgga 41
|||| ||||||||||| ||||||||||
Sbjct: 10 acatacttctttatatgcccatatgga 36
>28350_hsa-mir-1-1:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatgga 41
|||| ||||||||||| ||||||||||
Sbjct: 7 acatacttctttatatgcccatatgga 33
>30137_ptr-mir-1-1:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatgga 41
|||| ||||||||||| ||||||||||
Sbjct: 6 acatacttctttatatgcccatatgga 32
>30742_ppy-mir-1-1:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 15 acatgcttctttatatccccatatgga 41
|||| ||||||||||| ||||||||||
Sbjct: 7 acatacttctttatatgcccatatgga 33
