miRNEST 2.0, an integrative microRNA resource :: BLAST
>40024_ath-MIR162a:mirbase
Length = 140
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 75 aaagcatgaacagatcgataaacctctgcatccagcg 111
|||||||||| ||||||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 gctggaggcagcggttgatcgatctctt 47
|||||||||||||||| |||||||||||
Sbjct: 24 gctggaggcagcggttcatcgatctctt 51
>39812_aly-MIR162a:mirbase
Length = 228
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 75 aaagcatgaacagatcgataaacctctgcatccagcg 111
|||||||||| ||||||||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccagcg 158
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 gctggaggcagcggttgatcgatctctt 47
|||||||||||||||| |||||||||||
Sbjct: 67 gctggaggcagcggttcatcgatctctt 94
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 catgaacagatcgataaacctctgcatccagcg 111
||||||| |||||||||||||||||||||||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcg 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctt 47
||||||||||||||| |||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctctt 37
>39813_aly-MIR162b:mirbase
Length = 184
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 75 aaagcatgaacagatcgataaacctctgcatccagcg 111
|||||||||| |||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcg 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gctggaggcagcggttgatcgatc 43
|||||||||||||||| |||||||
Sbjct: 49 gctggaggcagcggttcatcgatc 72
>40342_rco-MIR162:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 gcatgaacagatcgataaacctctgcatccagcg 111
||||||| |||||||||||||||||||||||||
Sbjct: 65 gcatgaatcgatcgataaacctctgcatccagcg 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctt 47
||||||||||||||| |||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctctt 30
>41220_csi-MIR162:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccagcg 111
|||||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatccagcg 183
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctttgtg 51
||||||||||||||| ||||||| |||||||
Sbjct: 89 ctggaggcagcggttcatcgatcactttgtg 119
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccagcg 111
|||||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccagcg 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctt 47
||||||||||||||| |||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctctt 50
>40437_gma-MIR162:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccagcg 111
|||||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccagcg 95
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccagcg 111
|||||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccagcg 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctt 47
||||||||||||||| |||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctctt 39
>40025_ath-MIR162b:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccagcg 111
|||||||||||||||||||||||||
Sbjct: 77 gatcgataaacctctgcatccagcg 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gctggaggcagcggttgatcgatc 43
|||||||||||||||| |||||||
Sbjct: 11 gctggaggcagcggttcatcgatc 34
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaacagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatct 44
||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatct 34
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaacagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatct 44
||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatct 34
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>41578_vvi-MIR162:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccagcg 111
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>41090_tcc-MIR162:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttgatcgatctctt 47
||||||||||||||| |||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctctt 47
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>40663_mtr-MIR162:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccagcg 111
|||||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatccagcg 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 82 gaacagatcgataaacctctgcatccag 109
|||||||||||| |||| ||||||||||
Sbjct: 48 gaacagatcgatgaaccgctgcatccag 21
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41736_bdi-MIR162:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcc 107
|||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
