miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28599_hsa-mir-362:mirbase
Length = 65
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 cttgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggat 60
Query: 61 tcaaa 65
|||||
Sbjct: 61 tcaaa 65
>30341_ptr-mir-362:mirbase
Length = 64
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2 ttgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggatt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggatt 60
Query: 62 caaa 65
||||
Sbjct: 61 caaa 64
>27861_mml-mir-362:mirbase
Length = 65
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>27862_mml-mir-362:mirbase
Length = 65
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>30966_ppy-mir-362:mirbase
Length = 62
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>30965_ppy-mir-362:mirbase
Length = 62
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>26812_cfa-mir-362:mirbase
Length = 68
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gaatccttggaacctaggtgtgagtgctatttcggtgcaacacacctattcaaggattca 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>27143_eca-mir-362:mirbase
Length = 66
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 gaatccttggaacctaggtgtgagtgccatttcagtgcaacacacctattcaaggattca 64
Query: 64 aa 65
||
Sbjct: 65 aa 66
>27144_eca-mir-362:mirbase
Length = 66
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 gaatccttggaacctaggtgtgagtgccatttcagtgcaacacacctattcaaggattca 64
Query: 64 aa 65
||
Sbjct: 65 aa 66
>33335_bta-mir-362:mirbase
Length = 65
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>33336_bta-mir-362:mirbase
Length = 65
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgagtgctgttctagtgcaacacacctattcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>32032_mmu-mir-362:mirbase
Length = 65
Score = 91.7 bits (46), Expect = 5e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>32033_mmu-mir-362:mirbase
Length = 65
Score = 91.7 bits (46), Expect = 5e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>32881_rno-mir-362:mirbase
Length = 65
Score = 91.7 bits (46), Expect = 5e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 4 gaatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattca 63
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 4 gaatccttggaacctaggtgtgaatgctgcttcagtgcaacacacctgttcaaggattca 63
Query: 64 aa 65
||
Sbjct: 64 aa 65
>34070_ssc-mir-362:mirbase
Length = 79
Score = 89.7 bits (45), Expect = 2e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 5 aatccttggaacctaggtgtgagtgctatttcagtgcaacacacctattcaaggattcaa 64
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 11 aatccttggaacctaggtgtgagtgctgctctagtgcaacacacctattcaaggattcaa 70
Query: 65 a 65
|
Sbjct: 71 a 71
