miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27867_mml-mir-369:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctcag 70
||||||||||
Sbjct: 61 cttttctcag 70
>27868_mml-mir-369:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctcag 70
||||||||||
Sbjct: 61 cttttctcag 70
>28605_hsa-mir-369:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctcag 70
||||||||||
Sbjct: 61 cttttctcag 70
>30971_ppy-mir-369:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctcag 70
||||||||||
Sbjct: 61 cttttctcag 70
>30972_ppy-mir-369:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctcag 70
||||||||||
Sbjct: 61 cttttctcag 70
>30345_ptr-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 62 ttttctcag 70
|||||||||
Sbjct: 61 ttttctcag 69
>33342_bta-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 62 ttttctcag 70
|||||||||
Sbjct: 61 ttttctcag 69
>33343_bta-mir-369:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 60
Query: 62 ttttctcag 70
|||||||||
Sbjct: 61 ttttctcag 69
>33813_oar-mir-369:mirbase
Length = 107
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
Query: 62 ttttctcag 70
|||||||||
Sbjct: 79 ttttctcag 87
>33814_oar-mir-369:mirbase
Length = 107
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgatc 78
Query: 62 ttttctcag 70
|||||||||
Sbjct: 79 ttttctcag 87
>27150_eca-mir-369:mirbase
Length = 70
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctc 68
||||||||
Sbjct: 61 cttttctc 68
>27149_eca-mir-369:mirbase
Length = 70
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgtcatattcgctttattgacttcgaataatacatggttgat 60
Query: 61 cttttctc 68
||||||||
Sbjct: 61 cttttctc 68
>32039_mmu-mir-369:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 ttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgat 65
Query: 61 cttttctcag 70
||||||||||
Sbjct: 66 cttttctcag 75
>32040_mmu-mir-369:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 ttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgat 65
Query: 61 cttttctcag 70
||||||||||
Sbjct: 66 cttttctcag 75
>32884_rno-mir-369:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 ttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgat 65
Query: 61 cttttctcag 70
||||||||||
Sbjct: 66 cttttctcag 75
>32885_rno-mir-369:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 ttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgat 65
Query: 61 cttttctcag 70
||||||||||
Sbjct: 66 cttttctcag 75
>33072_rno-mir-3578:mirbase
Length = 117
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 91 ttgaagggagatcgaccgtgttatattcgcttagctgacttcgaataatacatggttgat 32
Query: 61 cttttctcag 70
||||||||||
Sbjct: 31 cttttctcag 22
>34075_ssc-mir-369:mirbase
Length = 149
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttattgacttcgaataatacatggttgat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 41 ttgaagggagatcgaccgtgttatattcgcttggctgacttcgaataatacatggttgat 100
Query: 61 cttttctcag 70
||||||||||
Sbjct: 101 cttttctcag 110
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 ttgaagggagatcgaccgtgttatattcgctttat 35
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaagggagatcgaccgtgttatattcgctttat 35
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 36 tgacttcgaataatacatggttgatcttttctcag 70
|||||||||||||||||||||||||||||||||||
Sbjct: 115 tgacttcgaataatacatggttgatcttttctcag 149
>26817_cfa-mir-369:mirbase
Length = 56
Score = 97.6 bits (49), Expect = 9e-22
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 12 tcgaccgtgttatattcgctttattgacttcgaataatacatggttgatcttt 64
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 tcgaccgtgttatattcgctttattgacttcgaataatacatggttggtcttt 56
