miRNEST 2.0, an integrative microRNA resource :: BLAST
>27877_mml-mir-374b:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
Query: 61 ttgtccgtgtct 72
||||||||||||
Sbjct: 61 ttgtccgtgtct 72
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 13
>30351_ptr-mir-374b:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
Query: 61 ttgtccgtgtc 71
|||||||||||
Sbjct: 61 ttgtccgtgtc 71
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 13
>28615_hsa-mir-374c:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 11
Query: 61 ttgtccgtgt 70
||||||||||
Sbjct: 10 ttgtccgtgt 1
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
>27155_eca-mir-374b:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
Query: 61 ttgtccgtgtct 72
||||||||||||
Sbjct: 61 ttgtccgtgtct 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 58 ataatacaacctgataagtg--ctaggacacttagcaggttgtattat 13
>33346_bta-mir-374b:mirbase
Length = 95
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 12 actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 71
Query: 61 ttgtccgtgtct 72
||||||||||||
Sbjct: 72 ttgtccgtgtct 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 69 ataatacaacctgataagtg--ctaggacacttagcaggttgtattat 24
>34077_ssc-mir-374b:mirbase
Length = 80
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 tcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatcatt 62
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60
Query: 63 gtccgtgtct 72
||||||||||
Sbjct: 61 gtccgtgtct 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 56 ataatacaacctgataagtg--ctaggacacttagcaggttgtattat 11
>34078_ssc-mir-374b:mirbase
Length = 80
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 tcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatcatt 62
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60
Query: 63 gtccgtgtct 72
||||||||||
Sbjct: 61 gtccgtgtct 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 56 ataatacaacctgataagtg--ctaggacacttagcaggttgtattat 11
>32042_mmu-mir-374:mirbase
Length = 95
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12 actcgggtggatataatacaacctgctaagtgttctagcacttagcaggttgtattatca 71
Query: 61 ttgtccg 67
|||||||
Sbjct: 72 ttgtccg 78
Score = 52.0 bits (26), Expect = 5e-08
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 69 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 24
>32887_rno-mir-374:mirbase
Length = 68
Score = 107 bits (54), Expect = 1e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 2 ctcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatcat 61
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||
Sbjct: 1 ctcggatggatataatacaacctgctaagtgttctagcacttagcacgttgtattattat 60
Query: 62 tgtccg 67
||||||
Sbjct: 61 tgtccg 66
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
|||||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 57 ataatacaacgtgctaagtgctagaacacttagcaggttgtattat 12
>26821_cfa-mir-374b:mirbase
Length = 52
Score = 95.6 bits (48), Expect = 4e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 11 atataatacaacctgctaagtgtcctagcacttagcaggttgtattatcatt 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 atataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 52
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 48 ataatacaacctgataagtg--ctaggacacttagcaggttgtattat 3
>32043_mmu-mir-374c:mirbase
Length = 49
Score = 89.7 bits (45), Expect = 2e-19
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 11 atataatacaacctgctaagtgtcctagcacttagcaggttgtattatc 59
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 49 atataatacaacctgctaagtgttctagcacttagcaggttgtattatc 1
Score = 52.0 bits (26), Expect = 5e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
>26820_cfa-mir-374a:mirbase
Length = 52
Score = 58.0 bits (29), Expect = 8e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtatt 56
|||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 2 tataatacaacctgataagtgttgtagcacttaccaggttgtatt 46
>27154_eca-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| |||||||| ||||||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 15 aatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
||||||||||| |||||| || |||||| |||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14
>28613_hsa-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| ||||||||| ||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtattgtaattgtctgtgt 71
>30350_ptr-mir-374a:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| ||||||||| ||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtattgtaattgtctgtgt 71
>30978_ppy-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| ||||||||| ||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttgtagcacttatcagattgtattgtaattgtctgtgt 71
>33345_bta-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| |||||||| ||||||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 15 aatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
||||||||||| |||||| || |||||| |||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14
>34076_ssc-mir-374a:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| |||||||| ||||||||||| | |||||| ||||
Sbjct: 11 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 15 aatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
||||||||||| |||||| || |||||| |||||||||||||
Sbjct: 55 aatacaacctgataagtgctgtaacacttatcaggttgtattat 12
>27876_mml-mir-374a:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 12 tataatacaacctgctaagtgtcctagcacttagcaggttgtattatcattgtccgtgt 70
|||||||||||||| ||||||| |||||||| ||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcagattgtattgtaattgtctgtgt 71
