miRNEST 2.0, an integrative microRNA resource :: BLAST
>27877_mml-mir-374b:mirbase
Length = 72
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Query: 61 ccatccgagt 70
||||||||||
Sbjct: 10 ccatccgagt 1
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
>28614_hsa-mir-374b:mirbase
Length = 72
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Query: 61 ccatccgagt 70
||||||||||
Sbjct: 10 ccatccgagt 1
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
>30351_ptr-mir-374b:mirbase
Length = 71
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Query: 61 ccatccgagt 70
||||||||||
Sbjct: 10 ccatccgagt 1
Score = 52.0 bits (26), Expect = 5e-08
Identities = 44/48 (91%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctag--cacttagcaggttgtattat 58
>27155_eca-mir-374b:mirbase
Length = 72
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 70 acacggacaatgataatacaacctgataagtgctaggacacttagcaggttgtattatat 11
Query: 61 ccatccgagt 70
||||||||||
Sbjct: 10 ccatccgagt 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 58
>33346_bta-mir-374b:mirbase
Length = 95
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 81 acacggacaatgataatacaacctgataagtgctaggacacttagcaggttgtattatat 22
Query: 61 ccatccgagt 70
||||||||||
Sbjct: 21 ccatccgagt 12
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 24 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 69
>34077_ssc-mir-374b:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 68 acacggacaatgataatacaacctgataagtgctaggacacttagcaggttgtattatat 9
Query: 61 ccatccga 68
||||||||
Sbjct: 8 ccatccga 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 11 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 56
>34078_ssc-mir-374b:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 68 acacggacaatgataatacaacctgataagtgctaggacacttagcaggttgtattatat 9
Query: 61 ccatccga 68
||||||||
Sbjct: 8 ccatccga 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 11 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 56
>32042_mmu-mir-374:mirbase
Length = 95
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 4 cggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatatcca 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 78 cggacaatgataatacaacctgctaagtgctagaacacttagcaggttgtattatatcca 19
Query: 64 tccgagt 70
||||||
Sbjct: 18 cccgagt 12
Score = 52.0 bits (26), Expect = 5e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtattat 58
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 24 ataatacaacctgctaagtgttctagcacttagcaggttgtattat 69
>32887_rno-mir-374:mirbase
Length = 68
Score = 107 bits (54), Expect = 1e-24
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 4 cggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattatatcca 63
|||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 66 cggacaataataatacaacgtgctaagtgctagaacacttagcaggttgtattatatcca 7
Query: 64 tccgag 69
||||||
Sbjct: 6 tccgag 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtattat 58
|||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 12 ataatacaacctgctaagtgttctagcacttagcacgttgtattat 57
>26821_cfa-mir-374b:mirbase
Length = 52
Score = 95.6 bits (48), Expect = 4e-21
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 9 aatgataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 52 aatgataatacaacctgataagtgctaggacacttagcaggttgtattatat 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/48 (89%), Gaps = 4/48 (8%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58
|||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 3 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 48
>32043_mmu-mir-374c:mirbase
Length = 49
Score = 89.7 bits (45), Expect = 2e-19
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 12 gataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
Score = 52.0 bits (26), Expect = 5e-08
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtattat 58
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 47 ataatacaacctgctaagtgttctagcacttagcaggttgtattat 2
>26820_cfa-mir-374a:mirbase
Length = 52
Score = 58.0 bits (29), Expect = 8e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 15 aatacaacctgctaagtgctaggacacttagcaggttgtattata 59
||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 46 aatacaacctggtaagtgctacaacacttatcaggttgtattata 2
>27154_eca-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaacctgataagtgctgtaacacttatcaggttgtattata 13
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtatt 56
||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 14 ataatacaacctgataagtgttacagcacttatcaggttgtatt 57
>28613_hsa-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||| ||| ||||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaatctgataagtgctataacacttatcaggttgtattata 13
>30350_ptr-mir-374a:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||| ||| ||||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaatctgataagtgctataacacttatcaggttgtattata 13
>30978_ppy-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||| ||| ||||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaatctgataagtgctacaacacttatcaggttgtattata 13
>33345_bta-mir-374a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaacctgataagtgctgtaacacttatcaggttgtattata 13
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtatt 56
||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 14 ataatacaacctgataagtgttacagcacttatcaggttgtatt 57
>34076_ssc-mir-374a:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 69 acacagacaattacaatacaacctgataagtgctgtaacacttatcaggttgtattata 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 13 ataatacaacctgctaagtgctaggacacttagcaggttgtatt 56
||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 12 ataatacaacctgataagtgttacagcacttatcaggttgtatt 55
>27876_mml-mir-374a:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1 acacggacaatgataatacaacctgctaagtgctaggacacttagcaggttgtattata 59
|||| |||||| | ||||||| ||| |||||||| ||||||| ||||||||||||||
Sbjct: 71 acacagacaattacaatacaatctgataagtgctgtaacacttatcaggttgtattata 13
