miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33366_bta-mir-421:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 gcacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatt 60
Query: 61 aattgggcgcctgctctgtgatctc 85
|||||||||||||||||||||||||
Sbjct: 61 aattgggcgcctgctctgtgatctc 85
>30368_ptr-mir-421:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 gcacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatt 60
Query: 61 aattgggcgcctgctctgtgatct 84
||||||||||||||||||||||||
Sbjct: 61 aattgggcgcctgctctgtgatct 84
>27172_eca-mir-421:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 2 cacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 60
Query: 62 attgggcgcctgctctgtg 80
|||||||||||||||||||
Sbjct: 61 attgggcgcctgctctgtg 79
>27896_mml-mir-421:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 2 cacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 60
Query: 62 attgggcgcctgctctgtg 80
|||||||||||||||||||
Sbjct: 61 attgggcgcctgctctgtg 79
>34088_ssc-mir-421:mirbase
Length = 78
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 3 acattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaa 60
Query: 63 ttgggcgcctgctctgtg 80
||||||||||||||||||
Sbjct: 61 ttgggcgcctgctctgtg 78
>32065_mmu-mir-421:mirbase
Length = 76
Score = 151 bits (76), Expect = 9e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 4 cattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaat 60
Query: 64 tgggcgcctgctctgt 79
||||||||||||||||
Sbjct: 61 tgggcgcctgctctgt 76
>32907_rno-mir-421:mirbase
Length = 79
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 2 cacattgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 61
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacactgtaggcctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacatta 60
Query: 62 attgggcgcctgctctgtg 80
|||||||||||||||||||
Sbjct: 61 attgggcgcctgctctgtg 79
>30997_ppy-mir-421:mirbase
Length = 85
Score = 141 bits (71), Expect = 9e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 15 tcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaattgggcgcctgc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaattgggcgcctgc 74
Query: 75 tctgtgatctc 85
|||||||||||
Sbjct: 75 tctgtgatctc 85
>26839_cfa-mir-421:mirbase
Length = 56
Score = 111 bits (56), Expect = 8e-26
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 14 ctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaattgggcg 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcattaaatgtttgttgaatgaaaaaatgaatcatcaacagacattaattgggcg 56
