miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31002_ppy-mir-425:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
Query: 61 aatgtcgtgtccgcccagtgctctttc 87
|||||||||||||||||||||||||||
Sbjct: 61 aatgtcgtgtccgcccagtgctctttc 87
>30372_ptr-mir-425:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
Query: 61 aatgtcgtgtccgcccagtgctcttt 86
||||||||||||||||||||||||||
Sbjct: 61 aatgtcgtgtccgcccagtgctcttt 86
>27901_mml-mir-425:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcccccgagaagccatcggg 60
Query: 61 aatgtcgtgtccgcccagtgctctttc 87
|||||||||||||||||||||||||||
Sbjct: 61 aatgtcgtgtccgcccagtgctctttc 87
>33370_bta-mir-425:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggg 60
Query: 61 aatgtcgtgtccgcccagtgctctttc 87
|||||||||||||||||||||||||||
Sbjct: 61 aatgtcgtgtccgcccagtgctctttc 87
>33371_bta-mir-425:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggg 60
Query: 61 aatgtcgtgtccgcccagtgctctttc 87
|||||||||||||||||||||||||||
Sbjct: 61 aatgtcgtgtccgcccagtgctctttc 87
>32068_mmu-mir-425:mirbase
Length = 85
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggga 61
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
Query: 62 atgtcgtgtccgcccagtgctcttt 86
|||||||||||||||||||||||||
Sbjct: 61 atgtcgtgtccgcccagtgctcttt 85
>32909_rno-mir-425:mirbase
Length = 83
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 4 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatatc 63
Query: 67 gtgtccgcccagtgctcttt 86
||||||||||||||||||||
Sbjct: 64 gtgtccgcccagtgctcttt 83
>34092_ssc-mir-425:mirbase
Length = 80
Score = 135 bits (68), Expect = 6e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 gctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaatgtc 64
Query: 67 gtgtccgcccagtgct 82
||||||||||||||||
Sbjct: 65 gtgtccgcccagtgct 80
>34093_ssc-mir-425:mirbase
Length = 80
Score = 135 bits (68), Expect = 6e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 7 gctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtc 66
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 gctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaatgtc 64
Query: 67 gtgtccgcccagtgct 82
||||||||||||||||
Sbjct: 65 gtgtccgcccagtgct 80
>26842_cfa-mir-425:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 14 aatgacacgatcactcccgttgagtgggcacccgagaagccatcgggaatgtcgtgtccg 73
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtcgtgtccg 60
Query: 74 ccc 76
|||
Sbjct: 61 ccc 63
>27449_mdo-mir-425:mirbase
Length = 85
Score = 105 bits (53), Expect = 5e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggga 61
|||| ||||||||||||||||||||||||||||||| || || || ||||||||||||||
Sbjct: 1 aaagtgctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcggga 60
Query: 62 atgtcgtgtccgcccagtgctcttt 86
|| ||||||||| ||| ||||||||
Sbjct: 61 atatcgtgtccgtccaatgctcttt 85
>31551_oan-mir-425:mirbase
Length = 103
Score = 101 bits (51), Expect = 8e-23
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 1 gaaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggg 60
|||| |||||||||||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 7 gaaatcgctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcggg 66
Query: 61 aatgtcgtgtccgcccagtgctctttc 87
||| ||||||||| ||| ||||||||
Sbjct: 67 aatatcgtgtccgtccaaagctctttc 93
>25855_xtr-mir-425:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 ttggaatgacacgatcactcccgttgag 37
||||||||||||||||||||||||||||
Sbjct: 4 ttggaatgacacgatcactcccgttgag 31
>26530_tgu-mir-425:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 gctttggaatgacacgatcactcccgttgag 37
|||||||||||||||||||||||||| ||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgag 39
>26531_tgu-mir-425:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 gctttggaatgacacgatcactcccgttgag 37
|||||||||||||||||||||||||| ||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgag 39
