miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31005_ppy-mir-432:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
Query: 61 actggatggctcctccatgtcttggagtagatca 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttggagtagatca 94
>30374_ptr-mir-432:mirbase
Length = 93
Score = 184 bits (93), Expect = 8e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 2 gactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcca 60
Query: 62 ctggatggctcctccatgtcttggagtagatca 94
|||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatggctcctccatgtcttggagtagatca 93
>27904_mml-mir-432:mirbase
Length = 94
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 tgactcctccatgtcttggagtaggtcattgggtggatcctctatttccttatgtgggcc 60
Query: 61 actggatggctcctccatgtcttggagtagatca 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttggagtagatca 94
>27178_eca-mir-432:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 5 tgactcctccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 64
Query: 61 actggatggctcctccatgtcttgg 85
|||||||||||||||||||||||||
Sbjct: 65 actggatggctcctccatgtcttgg 89
>26844_cfa-mir-432:mirbase
Length = 87
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||
Sbjct: 1 tgactcctccaggtcttggagtaggtcattgggtggatccttaatttccctatgtgggcc 60
Query: 61 actggatggctcctccatgtcttgg 85
|||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttgg 85
>33374_bta-mir-432:mirbase
Length = 90
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
Query: 61 actggatggctcctccatgtcttgg 85
|||||||||||||||||||||||||
Sbjct: 64 actggatggctcctccatgtcttgg 88
>33847_oar-mir-432:mirbase
Length = 90
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 tgactcctccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggcc 60
||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
Query: 61 actggatggctcctccatgtcttgg 85
|||||||||||||||||||||||||
Sbjct: 64 actggatggctcctccatgtcttgg 88
>34095_ssc-mir-432:mirbase
Length = 80
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 8 tccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggccactggat 67
|||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 1 tccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 60
Query: 68 ggctcctccatgtcttggag 87
|||||||||||| |||||||
Sbjct: 61 ggctcctccatggcttggag 80
>34096_ssc-mir-432:mirbase
Length = 80
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 8 tccaggtcttggagtaggtcattgggtggatcctctatttccttacgtgggccactggat 67
|||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 1 tccaggtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactggat 60
Query: 68 ggctcctccatgtcttggag 87
|||||||||||| |||||||
Sbjct: 61 ggctcctccatggcttggag 80
>32071_mmu-mir-432:mirbase
Length = 75
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 56 gggccactggatggctcctccatgtcttggagtagatca 94
|||||||||||||||||||||| |||||||||||||||
Sbjct: 27 gggccactggatggctcctccacttcttggagtagatca 65
