miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31006_ppy-mir-433:mirbase
Length = 93
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 aggatcatgatgggctcctcggtgttctccagg 93
>32072_mmu-mir-433:mirbase
Length = 124
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 63
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 64 aggatcatgatgggctcctcggtgttctccagg 96
>32912_rno-mir-433:mirbase
Length = 93
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 aggatcatgatgggctcctcggtgttctccagg 93
>30375_ptr-mir-433:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 2 cggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaa 60
Query: 62 ggatcatgatgggctcctcggtgttctccagg 93
||||||||||||||||||||||||||||||||
Sbjct: 61 ggatcatgatgggctcctcggtgttctccagg 92
>27905_mml-mir-433:mirbase
Length = 93
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 4 gggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaagg 63
Query: 64 atcatgatgggctcctcggtgttctccagg 93
||||||||||||||||||||||||||||||
Sbjct: 64 atcatgatgggctcctcggtgttctccagg 93
>27179_eca-mir-433:mirbase
Length = 124
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttaaga 63
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 64 aggatcatgatgggctcctcggtgttctccagg 96
>33375_bta-mir-433:mirbase
Length = 124
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 4 ccggggagaagtacggtgagcctgtcattgttcagagaggctagatcctccttgttgaga 63
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 64 aggatcatgatgggctcctcggtgttctccagg 96
>33848_oar-mir-433:mirbase
Length = 114
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 10 ccggggagaagtacggtgagcctgtcattgttcagagaggctagatcctccttgttgaga 69
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 70 aggatcatgatgggctcctcggtgttctccagg 102
>33849_oar-mir-433:mirbase
Length = 114
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 10 ccggggagaagtacggtgagcctgtcattgttcagagaggctagatcctccttgttgaga 69
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
|||||||||||||||||||||||||||||||||
Sbjct: 70 aggatcatgatgggctcctcggtgttctccagg 102
>26845_cfa-mir-433:mirbase
Length = 74
Score = 147 bits (74), Expect = 2e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 12 tacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaaggatcatgat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacggtgagcctgtcattattcagagaggctagatcctctgtgttgagaaggatcatgat 60
Query: 72 gggctcctcggtgt 85
||||||||||||||
Sbjct: 61 gggctcctcggtgt 74
