miRNEST 2.0, an integrative microRNA resource :: BLAST
>27907_mml-mir-449a:mirbase
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcagct 60
Query: 61 aacatgcaactgctgtcttattgcatataca 91
|||||||||||||||||||||||||||||||
Sbjct: 61 aacatgcaactgctgtcttattgcatataca 91
>31008_ppy-mir-449a:mirbase
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggct 60
Query: 61 aacatgcaactgctgtcttattgcatataca 91
||| |||||||||||||||||||||||||||
Sbjct: 61 aacgtgcaactgctgtcttattgcatataca 91
>30377_ptr-mir-449a:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 2 tgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggcta 61
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tgtgtgtgatgagctggcagtgtattgttagctcgttgaatatgtgaatggcatcggcta 60
Query: 62 acatgcaactgctgtcttattgcatataca 91
||||||||||||||||||||||||||||||
Sbjct: 61 acatgcaactgctgtcttattgcatataca 90
>26847_cfa-mir-449:mirbase
Length = 91
Score = 137 bits (69), Expect = 2e-33
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggctaa 62
|||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
Query: 63 catgcaactgctgtcttattgcatataca 91
|||||||||||| ||||||||||||||||
Sbjct: 63 catgcaactgctatcttattgcatataca 91
>33377_bta-mir-449a:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 4 tgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggctaac 63
||||||||| | ||||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct: 1 tgtgtgatgggttggcagtgtattgttagctggttgaatatgtgagtgccatcagctaac 60
Query: 64 atgcaactgctgtcttattgcat 86
||||||||||| |||||||||||
Sbjct: 61 atgcaactgctatcttattgcat 83
>27181_eca-mir-449a:mirbase
Length = 60
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 16 tggcagtgtattgttagctggttgaatatgtgaatggcatcggctaacatgcaactgct 74
||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 1 tggcagtgtattgttagctggttgaatatatgaatggcatcagctaacaagcaactgct 59
>32915_rno-mir-449a:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggct 60
||||||| |||| | ||||||||||||||||||||||||| ||||| || |||| | |||
Sbjct: 1 ctgtgtgcgatgggttggcagtgtattgttagctggttgagtatgtaaaaggcaccagct 60
Query: 61 aacatgcaactgctgtcttattgcatataca 91
|||||||||||||| || ||||||| |||||
Sbjct: 61 aacatgcaactgctctcctattgcacataca 91
>32077_mmu-mir-449a:mirbase
Length = 91
Score = 81.8 bits (41), Expect = 8e-17
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1 ctgtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggct 60
|||||||||||| ||||||||||||||||||||||||| ||||||| |||| | |||
Sbjct: 1 ctgtgtgtgatggcttggcagtgtattgttagctggttgagtatgtgagcggcaccagct 60
Query: 61 aacatgcaactgctgtcttattgca 85
||||||| |||||| || |||||||
Sbjct: 61 aacatgcgactgctctcctattgca 85
>27451_mdo-mir-449:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 6 tgtgatgagctggcagtgtattgttagctggttgaatatgtgaa 49
||||||| | ||||||||||||||||||||||||| ||| ||||
Sbjct: 1 tgtgatgggatggcagtgtattgttagctggttgactatctgaa 44
>31553_oan-mir-449a:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 16 tggcagtgtattgttagctggttgaatatgtgaatggca 54
||||||||| ||||||||||||||||||| | |||||||
Sbjct: 29 tggcagtgt-ttgttagctggttgaatatttaaatggca 66
>27908_mml-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>28655_hsa-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>30378_ptr-mir-449b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 16 ggcagtgtattgttagctgg 35
>31009_ppy-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>33378_bta-mir-449b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
