miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33379_bta-mir-449c:mirbase
Length = 106
Score = 73.8 bits (37), Expect = 2e-14
Identities = 75/86 (87%), Gaps = 5/86 (5%)
Strand = Plus / Plus
Query: 7 atgtgtcaggtaggcagtgtattgctagc-ggctgttaa----tgattttaacagttgct 61
||||||||||||||||||| || ||||| ||||||||| | ||||||||||||||
Sbjct: 12 atgtgtcaggtaggcagtgcatctctagctggctgttaaaatttctttttaacagttgct 71
Query: 62 agttgcactcctctctgttgcattca 87
||||||||||| ||||||||||||||
Sbjct: 72 agttgcactcccctctgttgcattca 97
>32079_mmu-mir-449c:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 52 aacagttgctagttgcactcctctctgttgcattcagaagc 92
|||||||||||| |||||| | ||||| |||| ||||||||
Sbjct: 65 aacagttgctagctgcactaccctctgctgcactcagaagc 105
>27908_mml-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tcaggtaggcagtgtattgctagc 35
||||||||||||||||||| ||||
Sbjct: 10 tcaggtaggcagtgtattgttagc 33
>28655_hsa-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tcaggtaggcagtgtattgctagc 35
||||||||||||||||||| ||||
Sbjct: 10 tcaggtaggcagtgtattgttagc 33
>30378_ptr-mir-449b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tcaggtaggcagtgtattgctagc 35
||||||||||||||||||| ||||
Sbjct: 9 tcaggtaggcagtgtattgttagc 32
>31009_ppy-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tcaggtaggcagtgtattgctagc 35
||||||||||||||||||| ||||
Sbjct: 10 tcaggtaggcagtgtattgttagc 33
>33378_bta-mir-449b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tcaggtaggcagtgtattgctagc 35
||||||||||||||||||| ||||
Sbjct: 10 tcaggtaggcagtgtattgttagc 33
