miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28660_hsa-mir-450b:mirbase
Length = 78
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
Query: 61 gcatccatagttttgtat 78
||||||||||||||||||
Sbjct: 61 gcatccatagttttgtat 78
>31012_ppy-mir-450b:mirbase
Length = 78
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
Query: 61 gcatccatagttttgtat 78
||||||||||||||||||
Sbjct: 61 gcatccatagttttgtat 78
>31013_ppy-mir-450b:mirbase
Length = 78
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
Query: 61 gcatccatagttttgtat 78
||||||||||||||||||
Sbjct: 61 gcatccatagttttgtat 78
>30381_ptr-mir-450b:mirbase
Length = 77
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
Query: 61 gcatccatagttttgta 77
|||||||||||||||||
Sbjct: 61 gcatccatagttttgta 77
>27183_eca-mir-450b:mirbase
Length = 79
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 5 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcat 65
Query: 65 ccatagttttgtat 78
||||||||||||||
Sbjct: 66 ccatagttttgtat 79
>27184_eca-mir-450b:mirbase
Length = 79
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 5 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcat 65
Query: 65 ccatagttttgtat 78
||||||||||||||
Sbjct: 66 ccatagttttgtat 79
>27911_mml-mir-450b:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcatttt 60
Query: 61 gcatccatagttttgtat 78
||||||||||||||||||
Sbjct: 61 gcatccatagttttgtat 78
>27912_mml-mir-450b:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 gcagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcatttt 60
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 gcagaattatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcatttt 60
Query: 61 gcatccatagttttgtat 78
||||||||||||||||||
Sbjct: 61 gcatccatagttttgtat 78
>34098_ssc-mir-450b:mirbase
Length = 80
Score = 131 bits (66), Expect = 8e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 5 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcat 64
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 3 aattatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcat 62
Query: 65 ccatagttttgtat 78
||||||||||||||
Sbjct: 63 ccatagttttgtat 76
>34099_ssc-mir-450b:mirbase
Length = 80
Score = 131 bits (66), Expect = 8e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 5 aattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcat 64
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 3 aattatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcat 62
Query: 65 ccatagttttgtat 78
||||||||||||||
Sbjct: 63 ccatagttttgtat 76
>26849_cfa-mir-450b:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 11 ttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatccat 68
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcatccat 58
>32082_mmu-mir-450b:mirbase
Length = 82
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
Query: 62 catccatagttttgtat 78
||| |||| ||||||||
Sbjct: 65 catgcataattttgtat 81
>32083_mmu-mir-450b:mirbase
Length = 82
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 2 cagaattatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttg 61
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||| |||||||
Sbjct: 5 cagaattatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttg 64
Query: 62 catccatagttttgtat 78
||| |||| ||||||||
Sbjct: 65 catgcataattttgtat 81
>27186_eca-mir-451a:mirbase
Length = 89
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||| ||||||||| |||||||||| |||||||||| ||
Sbjct: 15 tatttttgcgatgtgttcct-aatacgtaatataaatgtattgggaacattttgcattca 73
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 74 tagttttgtat 84
>27910_mml-mir-450a-2:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||| ||
Sbjct: 20 tatttttgcgatgtgttcct-aatatgtaatataaatgtattggggacattttgcattca 78
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 79 tagttttgtat 89
>28658_hsa-mir-450a-2:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||| ||
Sbjct: 20 tatttttgcgatgtgttcct-aatatgtaatataaatgtattggggacattttgcattca 78
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 79 tagttttgtat 89
>30380_ptr-mir-450a-2:mirbase
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||| ||
Sbjct: 20 tatttttgcgatgtgttcct-aatatgtaatataaatgtattggggacattttgcattca 78
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 79 tagttttgtat 89
>33381_bta-mir-450:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||||||||| ||| |||||||||| |||||||||| ||
Sbjct: 19 tatttttgcgatgtgttcct-aatatgtaatctaaatgtattgggaacattttgcattca 77
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 78 tagttttgtat 88
>31011_ppy-mir-450a-2:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 2e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
Query: 68 tagttttgtat 78
|||||||||||
Sbjct: 79 tagttttgtat 89
>34100_ssc-mir-450c:mirbase
Length = 81
Score = 65.9 bits (33), Expect = 4e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||| ||||| |||||||||||||| |||||||||| |
Sbjct: 11 tatttttgcgatgtgttcct-aatacgtaatctaagtgtattgggaacattttgcattcg 69
Query: 68 tagttttgt 76
|||||||||
Sbjct: 70 tagttttgt 78
>34101_ssc-mir-450c:mirbase
Length = 81
Score = 65.9 bits (33), Expect = 4e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
||||||||| || ||||||| |||| ||||| |||||||||||||| |||||||||| |
Sbjct: 11 tatttttgcgatgtgttcct-aatacgtaatctaagtgtattgggaacattttgcattcg 69
Query: 68 tagttttgt 76
|||||||||
Sbjct: 70 tagttttgt 78
>27909_mml-mir-450a-1:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatccata 69
||||||| || ||||||| |||||||| ||||| | |||||||| |||||||||| ||
Sbjct: 17 tttttgcgatgtgttcct-aatatgtactataaatatattgggaacattttgcatgtgta 75
Query: 70 gttttgtat 78
|||||||||
Sbjct: 76 gttttgtat 84
>28657_hsa-mir-450a-1:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatccata 69
||||||| || ||||||| |||||| | ||||| | |||||||| |||||||||| |||
Sbjct: 17 tttttgcgatgtgttcct-aatatgcactataaatatattgggaacattttgcatgtata 75
Query: 70 gttttgtat 78
|||||||||
Sbjct: 76 gttttgtat 84
>30379_ptr-mir-450a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 10 tttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatccata 69
||||||| || ||||||| |||||| | ||||| | |||||||| |||||||||| |||
Sbjct: 17 tttttgcgatgtgttcct-aatatgcactataaatatattgggaacattttgcatgtata 75
Query: 70 gttttgtat 78
|||||||||
Sbjct: 76 gttttgtat 84
