miRNEST 2.0, an integrative microRNA resource :: BLAST
>27935_mml-mir-495:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||||||||||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>30398_ptr-mir-495:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 2 ggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatgg 60
Query: 62 tgcacttctttttcggtatca 82
|||||||||||||||||||||
Sbjct: 61 tgcacttctttttcggtatca 81
>31034_ppy-mir-495:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 4 tacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtg 60
Query: 64 cacttctttttcggtatca 82
|||||||||||||||||||
Sbjct: 61 cacttctttttcggtatca 79
>27205_eca-mir-495:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||||||||||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>32937_rno-mir-495:mirbase
Length = 80
Score = 111 bits (56), Expect = 8e-26
Identities = 76/80 (95%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 4 tacctgaaaagaagttgcccatgttatttt-cgcttt-atatgtgacgaaacaaacatgg 61
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 1 tacctgaaaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatgg 60
Query: 62 tgcacttctttttcggtatc 81
||||||||||||||| ||||
Sbjct: 61 tgcacttctttttcgatatc 80
>33860_oar-mir-495:mirbase
Length = 126
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
|||||||||| ||||||| ||||||||| ||||||||| || |||| |||||||||||||
Sbjct: 30 tggtacctgagaagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatg 89
Query: 61 gtgcacttctttttcggt 78
||||||||||||||||||
Sbjct: 90 gtgcacttctttttcggt 107
>33861_oar-mir-495:mirbase
Length = 126
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
|||||||||| ||||||| ||||||||| ||||||||| || |||| |||||||||||||
Sbjct: 30 tggtacctgagaagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatg 89
Query: 61 gtgcacttctttttcggt 78
||||||||||||||||||
Sbjct: 90 gtgcacttctttttcggt 107
>33400_bta-mir-495:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
|||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1 tggtgcctggaaagaagttgcccatgttcttttcgctg-atatgtgacgaaacaaacatg 59
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||| ||| ||||
Sbjct: 60 gtgcacttcttttccggcatca 81
>32184_mmu-mir-495:mirbase
Length = 63
Score = 85.7 bits (43), Expect = 4e-18
Identities = 60/63 (95%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 11 aaagaagttgcccatgttatttt-cgcttt-atatgtgacgaaacaaacatggtgcactt 68
||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||
Sbjct: 1 aaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatggtgcactt 60
Query: 69 ctt 71
|||
Sbjct: 61 ctt 63
>26864_cfa-mir-495:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 14 gaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttctt 71
|||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||
Sbjct: 1 gaagttgcccgtgttattttcgcttgatacgtgccgaaacaaacatggtgcacttctt 58
>28791_hsa-mir-543:mirbase
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| |||||||||||| |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 70 ttcagtatc 78
>31130_ppy-mir-543:mirbase
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| |||||||||||| |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 70 ttcagtatc 78
>33414_bta-mir-543:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 72 ttcagtatc 80
>33868_oar-mir-543:mirbase
Length = 123
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 100 ttcagtatc 108
>33869_oar-mir-543:mirbase
Length = 123
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 100 ttcagtatc 108
>27229_eca-mir-543:mirbase
Length = 72
Score = 69.9 bits (35), Expect = 3e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| |||||||||||| |||||||||||| | |||||||||||||
Sbjct: 8 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 67
Query: 73 ttc 75
|||
Sbjct: 68 ttc 70
>27993_mml-mir-543:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| |||||||||||| |||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgtgtctttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 72 ttcagtatc 80
>30467_ptr-mir-543:mirbase
Length = 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| |||||||||||| |||||||||||| | ||||||||||||
Sbjct: 9 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttc 68
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 69 ttcagtatc 77
>32208_mmu-mir-543:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| || ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgcgtgtttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttc 75
|||
Sbjct: 70 ttc 72
>32954_rno-mir-543:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| || ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgcgtgtttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttc 75
|||
Sbjct: 72 ttc 74
>26877_cfa-mir-543:mirbase
Length = 58
Score = 60.0 bits (30), Expect = 3e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 14 gaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgcacttctt 71
|||||||||| |||| |||||||||||| |||||||||||| | ||||||||||||
Sbjct: 1 gaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttctt 58
