miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30401_ptr-mir-498:mirbase
Length = 124
Score = 226 bits (114), Expect = 3e-60
Identities = 117/118 (99%)
Strand = Plus / Plus
Query: 7 ccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctataactgga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctataactgga 66
Query: 67 tgaaaagcacctccagagcttgaagctcacagtttgagagcaatcgtctaaggaagtt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tgaaaagcacctccagggcttgaagctcacagtttgagagcaatcgtctaaggaagtt 124
>31037_ppy-mir-498:mirbase
Length = 124
Score = 222 bits (112), Expect = 5e-59
Identities = 121/124 (97%)
Strand = Plus / Plus
Query: 1 aaccctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 aaccctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctgta 60
Query: 61 actggatgaaaagcacctccagagcttgaagctcacagtttgagagcaatcgtctaagga 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 61 actggatgaaaagcacctccagggcttgaagctcacagtttgagagcaatcgtctaacga 120
Query: 121 agtt 124
||||
Sbjct: 121 agtt 124
>27938_mml-mir-498:mirbase
Length = 124
Score = 200 bits (101), Expect = 2e-52
Identities = 116/121 (95%)
Strand = Plus / Plus
Query: 4 cctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctataact 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 4 cctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctgtgact 63
Query: 64 ggatgaaaagcacctccagagcttgaagctcacagtttgagagcaatcgtctaaggaagt 123
||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 64 ggatgaaaagcacctccggggcttgaagctcacagtttgagagcaatcatctaaggaagt 123
Query: 124 t 124
|
Sbjct: 124 t 124
