miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31045_ppy-mir-504:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
Query: 61 gcagggtttcccatacagagggc 83
|||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagagggc 83
>30408_ptr-mir-504:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
Query: 61 gcagggtttcccatacagaggg 82
||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagaggg 82
>27946_mml-mir-504:mirbase
Length = 83
Score = 157 bits (79), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagcgcagg 60
Query: 61 gcagggtttcccatacagagggc 83
|||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagagggc 83
>26871_cfa-mir-504:mirbase
Length = 83
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctatctgtatgcttactgaagggagcgcagg 60
Query: 61 gcagggtttcccatacagagggc 83
|||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagagggc 83
>27216_eca-mir-504:mirbase
Length = 83
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctatctgtatgcttactgaagggagcgcagg 60
Query: 61 gcagggtttcccatacagagggc 83
|||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagagggc 83
>33408_bta-mir-504:mirbase
Length = 83
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagg 60
||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactctgtctgtatgcttactgaagggagcgcagg 60
Query: 61 gcagggtttcccatacagagggc 83
|||||||||||||||||||||||
Sbjct: 61 gcagggtttcccatacagagggc 83
>34116_ssc-mir-504:mirbase
Length = 80
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 4 gctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagggca 63
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1 gctgttgggagaccctggtctgcactctatctgtatgcttactgaagggagcgcagggca 60
Query: 64 gggtttcccatacagagggc 83
|||||||||| |||||||||
Sbjct: 61 gggtttcccacacagagggc 80
>32192_mmu-mir-504:mirbase
Length = 79
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 5 ctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagggcag 64
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 3 ctgttgggagaccctggtctgcactctatctgtaaacttactgaagggagagcagggcag 62
Query: 65 ggtttcccatacagagg 81
|||||||||||||||||
Sbjct: 63 ggtttcccatacagagg 79
>32944_rno-mir-504:mirbase
Length = 77
Score = 105 bits (53), Expect = 5e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 5 ctgttgggagaccctggtctgcactctatctgtattcttactgaagggagtgcagggcag 64
||||||||||||||||||||||||||| |||| | ||||| |||||||| |||||||||
Sbjct: 1 ctgttgggagaccctggtctgcactctgtctggaaacttacagaagggagagcagggcag 60
Query: 65 ggtttcccatacagagg 81
|||||||||||||||||
Sbjct: 61 ggtttcccatacagagg 77
