miRNEST 2.0, an integrative microRNA resource :: BLAST
>27217_eca-mir-505:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
Query: 61 tgctggtttcctctctggagcatc 84
||||||||||||||||||||||||
Sbjct: 61 tgctggtttcctctctggagcatc 84
>27947_mml-mir-505:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
Query: 61 tgctggtttcctctctggagcatc 84
||||||||||||||||||||||||
Sbjct: 61 tgctggtttcctctctggagcatc 84
>30409_ptr-mir-505:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
Query: 61 tgctggtttcctctctggagcat 83
|||||||||||||||||||||||
Sbjct: 61 tgctggtttcctctctggagcat 83
>31046_ppy-mir-505:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
Query: 61 tgctggtttcctctctggagcat 83
|||||||||||||||||||||||
Sbjct: 61 tgctggtttcctctctggagcat 83
>33409_bta-mir-505:mirbase
Length = 90
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6 gatgcacccagtgggggagccaggaagtattgatgtttctaccagtttagcgtcaacact 65
Query: 61 tgctggtttcctctctggagc 81
|||||||||||||||||||||
Sbjct: 66 tgctggtttcctctctggagc 86
>26872_cfa-mir-505:mirbase
Length = 76
Score = 151 bits (76), Expect = 9e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 9 cagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacacttgctggtt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacacttgctggtt 60
Query: 69 tcctctctggagcatc 84
||||||||||||||||
Sbjct: 61 tcctctctggagcatc 76
>33088_rno-mir-3589:mirbase
Length = 112
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 98 gatgcacccagtgggggagccaggaagtattgatgtttctgccaggttagcgtcaacact 39
Query: 61 tgctggtttcctctctggag 80
||||||||||||||||||||
Sbjct: 38 tgctggtttcctctctggag 19
>32193_mmu-mir-505:mirbase
Length = 90
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6 gatgcacccagtgggggagccaggaagtattgatgtttctgccaggttagcgtcaacact 65
Query: 61 tgctggtttcctctctggag 80
||||||||| ||||||||||
Sbjct: 66 tgctggttttctctctggag 85
>32194_mmu-mir-505:mirbase
Length = 90
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gatgcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacact 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6 gatgcacccagtgggggagccaggaagtattgatgtttctgccaggttagcgtcaacact 65
Query: 61 tgctggtttcctctctggag 80
||||||||| ||||||||||
Sbjct: 66 tgctggttttctctctggag 85
>34117_ssc-mir-505:mirbase
Length = 80
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 4 gcacccagtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacacttgc 63
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gcactcagtgggggagccaggaagtattgatgtttctgccaggttagcgtcaacacttgc 60
Query: 64 tggtttcctctctggagcat 83
||||||||||||||||||||
Sbjct: 61 tggtttcctctctggagcat 80
>32945_rno-mir-505:mirbase
Length = 67
Score = 125 bits (63), Expect = 5e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 10 agtgggggagccaggaagtattgatgtttctgccagtttagcgtcaacacttgctggttt 69
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 agtgggggagccaggaagtattgatgtttctgccaggttagcgtcaacacttgctggttt 60
Query: 70 cctctct 76
|||||||
Sbjct: 61 cctctct 67
