miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30411_ptr-mir-507:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
Query: 61 caccttttggagtgaaataatgcacaacagatac 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 caccttttggagtgaaataatgcacaacagatac 94
>31048_ppy-mir-507:mirbase
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
Query: 61 caccttttggagtgaaataatgcacaacag 90
||||||||||||||||||||||||||||||
Sbjct: 61 caccttttggagtgaaataatgcacaacag 90
>27949_mml-mir-507:mirbase
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaataagtgccattcatgtgtctagaaatatgttttg 60
Query: 61 caccttttggagtgaaataatgcacaacag 90
||||||||||||||||||||||||||||||
Sbjct: 61 caccttttggagtgaaataatgcacaacag 90
>28242_pbi-mir-507:mirbase
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaataagtgccattcatgtgtctagaaatatgttttg 60
Query: 61 caccttttggagtgaaataatgcacaacag 90
||||||||||||||||||||||||||||||
Sbjct: 61 caccttttggagtgaaataatgcacaacag 90
>31383_ssy-mir-507:mirbase
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaataagtgccattcatgtgtctagaaatatgttttg 60
Query: 61 caccttttggagtgaaataatgcacaacag 90
||||||||||||||||||||||||||||||
Sbjct: 61 caccttttggagtgaaataatgcacaacag 90
>27523_age-mir-507:mirbase
Length = 94
Score = 115 bits (58), Expect = 6e-27
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 1 gtgctgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttg 60
|||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| |
Sbjct: 1 gtgctgtgtgtagtgcttcacttcaattagtgccattcatgtggctagaaatttgtttgg 60
Query: 61 caccttttggagtgaaataatgcacaacag 90
||| |||| |||||||||||||||||||||
Sbjct: 61 cactttttagagtgaaataatgcacaacag 90
>27218_eca-mir-507:mirbase
Length = 95
Score = 91.7 bits (46), Expect = 8e-20
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 5 tgtgtgtagtgcttcacttcaagaagtgccatgcatgtgtctagaaatatgttttgcacc 64
|||||| |||||| ||||||| |||||||||| |||||| ||||||||||| || |||||
Sbjct: 6 tgtgtgcagtgctccacttcaggaagtgccatccatgtggctagaaatatgattggcacc 65
Query: 65 ttttggagtgaaataatgcacaacag 90
| || ||||||| |||||||||||||
Sbjct: 66 tcttagagtgaagtaatgcacaacag 91
