miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28706_hsa-mir-508:mirbase
Length = 115
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaaca 60
Query: 61 tgattgtagccttttggagtagagtaatacacatcacgtaacgcatatttggtgg 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgattgtagccttttggagtagagtaatacacatcacgtaacgcatatttggtgg 115
>31049_ppy-mir-508:mirbase
Length = 115
Score = 204 bits (103), Expect = 1e-53
Identities = 112/115 (97%)
Strand = Plus / Plus
Query: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaaca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcacgtaaactaaaaca 60
Query: 61 tgattgtagccttttggagtagagtaatacacatcacgtaacgcatatttggtgg 115
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tgattgtagcctttttgagtagagtaatacacatcacgtaaggcatatttggtgg 115
>31050_ppy-mir-508:mirbase
Length = 115
Score = 204 bits (103), Expect = 1e-53
Identities = 112/115 (97%)
Strand = Plus / Plus
Query: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaaca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ccaccttcagctgagtgtagtgccctactccagagggcgtcactcacgtaaactaaaaca 60
Query: 61 tgattgtagccttttggagtagagtaatacacatcacgtaacgcatatttggtgg 115
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tgattgtagcctttttgagtagagtaatacacatcacgtaaggcatatttggtgg 115
>30412_ptr-mir-508:mirbase
Length = 85
Score = 145 bits (73), Expect = 8e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 12 tgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattgtagcc 71
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 tgagtgtagtgccctactccagagggcatcagtcatgtaaactaaaacatgattgtagcc 60
Query: 72 ttttggagtagagtaatacacatca 96
|||| ||||||||||||||||||||
Sbjct: 61 tttttgagtagagtaatacacatca 85
>31384_ssy-mir-508:mirbase
Length = 85
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 12 tgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattgtagcc 71
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1 tgagtgtagtgccctactccagagggcgtcactcacgtaaactaacacatgattgtagcc 60
Query: 72 ttttggagtagagtaatacacatca 96
||| ||||||||||||||||||||
Sbjct: 61 cttttgagtagagtaatacacatca 85
>27950_mml-mir-508:mirbase
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 12 tgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattgtagcc 71
||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 1 tgagtgtcgtgctctactccagagggcgtcactcacataaactaaaacatgattgtcgcc 60
Query: 72 ttttggagtagagtaatacacatca 96
|||| ||||||||||||||||||||
Sbjct: 61 tttttgagtagagtaatacacatca 85
>27219_eca-mir-508:mirbase
Length = 117
Score = 107 bits (54), Expect = 2e-24
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 7 tcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattg 66
||||||| ||||||||||||||||||||||| |||| ||| || |||||| ||||||||
Sbjct: 8 tcagctgggtgtagtgccctactccagagggtgtcattcacatagactaaagcatgattg 67
Query: 67 tagccttttggagtagagtaatacacatca 96
| |||||||||||||||||||||||||||
Sbjct: 68 tcaccttttggagtagagtaatacacatca 97
>27220_eca-mir-508:mirbase
Length = 117
Score = 107 bits (54), Expect = 2e-24
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 7 tcagctgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattg 66
||||||| ||||||||||||||||||||||| |||| ||| || |||||| ||||||||
Sbjct: 8 tcagctgggtgtagtgccctactccagagggtgtcattcacatagactaaagcatgattg 67
Query: 67 tagccttttggagtagagtaatacacatca 96
| |||||||||||||||||||||||||||
Sbjct: 68 tcaccttttggagtagagtaatacacatca 97
>28243_pbi-mir-508:mirbase
Length = 85
Score = 105 bits (53), Expect = 7e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 12 tgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattgtagcc 71
|||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 1 tgagtgtagtgctctactccagagggcgtcaatcacataaactaaaacatgattgtcacc 60
Query: 72 ttttggagtagagtaatacacatca 96
|||| |||||||| |||||||||||
Sbjct: 61 tttttgagtagagcaatacacatca 85
>27524_age-mir-508:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 2e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 12 tgagtgtagtgccctactccagagggcgtcactcatgtaaactaaaacatgattgtagcc 71
|||||||||||||||||||||||||| |||| ||| ||||||||| || |||||| ||
Sbjct: 1 tgagtgtagtgccctactccagagggtgtcaatcacataaactaaagcacgattgtcacc 60
Query: 72 ttttggagtagagtaatacacatca 96
|||| ||||||||||||||||||||
Sbjct: 61 tttttgagtagagtaatacacatca 85
