miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28711_hsa-mir-509-3:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagacgtggcaatcatgtataattaaaaatgattggtacgtctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtaccctactgcagacgtggcaatcatgtataattaaaaatgattggtacgtctgtg 60
Query: 61 ggtagagtactgcat 75
|||||||||||||||
Sbjct: 61 ggtagagtactgcat 75
>30415_ptr-mir-509b:mirbase
Length = 93
Score = 141 bits (71), Expect = 8e-35
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagacgtggcaatcatgtataattaaaaatgattggtacgtctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacgtggcaatcatgtataattaaaaatgattggtacgtctgtg 70
Query: 61 ggtagagtactgcat 75
||||||||||||||
Sbjct: 71 agtagagtactgcat 85
>28707_hsa-mir-509-1:mirbase
Length = 94
Score = 135 bits (68), Expect = 5e-33
Identities = 75/76 (98%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
||||||||||||||||
Sbjct: 71 gggtagagtactgcat 86
>28708_hsa-mir-509-1:mirbase
Length = 94
Score = 135 bits (68), Expect = 5e-33
Identities = 75/76 (98%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
||||||||||||||||
Sbjct: 71 gggtagagtactgcat 86
>28709_hsa-mir-509-2:mirbase
Length = 91
Score = 135 bits (68), Expect = 5e-33
Identities = 75/76 (98%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
||||||||||||||||
Sbjct: 71 gggtagagtactgcat 86
>28710_hsa-mir-509-2:mirbase
Length = 91
Score = 135 bits (68), Expect = 5e-33
Identities = 75/76 (98%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
||||||||||||||||
Sbjct: 71 gggtagagtactgcat 86
>30413_ptr-mir-509a-1:mirbase
Length = 94
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
|| |||||||||||||
Sbjct: 71 ggatagagtactgcat 86
>30414_ptr-mir-509a-2:mirbase
Length = 94
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
|| |||||||||||||
Sbjct: 71 ggatagagtactgcat 86
>31051_ppy-mir-509-1:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 70
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 71 aggtagagtactgcat 86
>31052_ppy-mir-509-1:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 70
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 71 aggtagagtactgcat 86
>31053_ppy-mir-509-2:mirbase
Length = 91
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 70
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 71 aggtagagtactgcat 86
>31054_ppy-mir-509-2:mirbase
Length = 91
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 70
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 71 aggtagagtactgcat 86
>31055_ppy-mir-509-3:mirbase
Length = 76
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 60
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 61 aggtagagtactgcat 76
>31056_ppy-mir-509-3:mirbase
Length = 76
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattggtacgtctgc 60
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 61 aggtagagtactgcat 76
>31385_ssy-mir-509a:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactacaggcagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
||||||||||||||||
Sbjct: 71 gggtagagtactgcat 86
>31386_ssy-mir-509b:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcaggcagtggcaatcatgtataattaaaaatgattggtacgtctgt 70
Query: 60 gggtagagtactgcat 75
|||||||||||||||
Sbjct: 71 aggtagagtactgcat 86
>27951_mml-mir-509-1:mirbase
Length = 94
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||||||| | |||||||| ||||||| |||||||||||||||| ||||||
Sbjct: 11 gtggtaccctactgcaggcagtggcaattatgtatagttaaaaatgattggtatgtctgt 70
Query: 60 gggtagagtactgcat 75
|||||||||| |||||
Sbjct: 71 gggtagagtaatgcat 86
>27952_mml-mir-509-2:mirbase
Length = 94
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||| ||| | |||||||||||||||| |||||||||||||||| ||||||
Sbjct: 11 gtggtaccctactacaggcagtggcaatcatgtatagttaaaaatgattggtatgtctgt 70
Query: 60 gggtagagtactgcat 75
|||||||||| |||||
Sbjct: 71 gggtagagtaatgcat 86
>28244_pbi-mir-509:mirbase
Length = 94
Score = 87.7 bits (44), Expect = 1e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
||||||||||||| ||| | ||||||||| |||||| ||||||||||||| |||||||||
Sbjct: 11 gtggtaccctacttcaggcagtggcaatcctgtatagttaaaaatgattgatacgtctgt 70
Query: 60 gggtagagtactgcat 75
|||||||||| |||||
Sbjct: 71 gggtagagtaatgcat 86
>27221_eca-mir-509:mirbase
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 49/50 (98%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattg 49
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11 gtggtaccctactgcagacagtggcaatcatgtataattaaaaatgattg 60
>27525_age-mir-509a:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 4e-09
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
|||||||||| ||||||| |||||||| | |||||||||||||||||| |||||||
Sbjct: 11 gtggtaccctgctgcagagagtggcaattgtatataattaaaaatgattgacacgtctgc 70
Query: 60 gggtagagtactgcat 75
||||||||| |||||
Sbjct: 71 aggtagagtaatgcat 86
>27526_age-mir-509b:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 4e-09
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gtggtaccctactgcagac-gtggcaatcatgtataattaaaaatgattggtacgtctgt 59
|||||||||| ||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 11 gtggtaccctgctgcagagagtggcaatcgtatataattaaaaatgattgacacgtctgc 70
Query: 60 gggtagagtactgcat 75
| ||||||| |||||
Sbjct: 71 agatagagtaatgcat 86
>27962_mml-mir-514:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 24 caatcatgtataattaaaaatgattggtacgtctgtgggtagagtactgcat 75
|||||||||||||||||| |||||| || |||||| |||||||| |||||
Sbjct: 34 caatcatgtataattaaatttgattgacacttctgtgagtagagtaatgcat 85
>28251_pbi-mir-514:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 24 caatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
|||||||||||||||||| |||||| || |||||| ||||||||
Sbjct: 34 caatcatgtataattaaatttgattgacacttctgtgagtagagta 79
>28726_hsa-mir-514-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 24 caatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
|||||||||||||||||| |||||| || |||||| ||||||||
Sbjct: 37 caatcatgtataattaaatttgattgacacttctgtgagtagagta 82
>30423_ptr-mir-514-1:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 24 caatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
|||||||||||||||||| |||||| || |||||| ||||||||
Sbjct: 30 caatcatgtataattaaatttgattgacacttctgtgagtagagta 75
>31068_ppy-mir-514-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 20 gtggcaatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
||||||||||||| |||||||| |||||| || |||||| ||||||||
Sbjct: 33 gtggcaatcatgtgtaattaaatttgattgacacctctgtgagtagagta 82
>31069_ppy-mir-514-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 20 gtggcaatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
||||||||||||| |||||||| |||||| || |||||| ||||||||
Sbjct: 28 gtggcaatcatgtgtaattaaatttgattgacacctctgtgagtagagta 77
>31070_ppy-mir-514-3:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 20 gtggcaatcatgtataattaaaaatgattggtacgtctgtgggtagagta 69
||||||||||||| |||||||| |||||| || |||||| ||||||||
Sbjct: 28 gtggcaatcatgtgtaattaaatttgattgacacctctgtgagtagagta 77
