miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28714_hsa-mir-511-1:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatannnnnnngtgaatgtgt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatatttttttgtgaatgtgt 60
Query: 61 agcaaaagacagaatggtggtccattg 87
|||||||||||||||||||||||||||
Sbjct: 61 agcaaaagacagaatggtggtccattg 87
>31058_ppy-mir-511-1:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatannnnnnngtgaatgtgt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatatttttttgtgaatgtgt 60
Query: 61 agcaaaagacagaatggtggtccattg 87
|||||||||||||||||||||||||||
Sbjct: 61 agcaaaagacagaatggtggtccattg 87
>31059_ppy-mir-511-2:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatannnnnnngtgaatgtgt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatatttttttgtgaatgtgt 60
Query: 61 agcaaaagacagaatggtggtccattg 87
|||||||||||||||||||||||||||
Sbjct: 61 agcaaaagacagaatggtggtccattg 87
>30417_ptr-mir-511:mirbase
Length = 86
Score = 129 bits (65), Expect = 4e-31
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 2 aatagacacccatcgtgtcttttgctctgcagtcagtaaatannnnnnngtgaatgtgta 61
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 aatagacacccatcgtgtcttttgctctgcagtcagtaaatattttgttgtgaatgtgta 60
Query: 62 gcaaaagacagaatggtggtccattg 87
||||||||||||||||||||||||||
Sbjct: 61 gcaaaagacagaatggtggtccattg 86
>27954_mml-mir-511:mirbase
Length = 87
Score = 107 bits (54), Expect = 1e-24
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 1 caatagacacccatcgtgtcttttgctctgcagtcagtaaatannnnnnngtgaatgtgt 60
||||||||||||| | ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 caatagacacccaccttgtcttttgctctgcagtcagtaaatatttttttgtgaatgtgt 60
Query: 61 agcaaaagacagaatggtggtccattg 87
||||||||||||||||| |||||||||
Sbjct: 61 agcaaaagacagaatgggggtccattg 87
>32198_mmu-mir-511:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 20 cttttgctctgcagtcagtaaatannnnnnngtgaatgtgtagcaaaagacagaatgg 77
||||||||||||| |||||||||| |||||||||||||||||||||| ||||
Sbjct: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
>32197_mmu-mir-511:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 20 cttttgctctgcagtcagtaaatannnnnnngtgaatgtgtagcaaaagacagaatgg 77
||||||||||||| |||||||||| |||||||||||||||||||||| ||||
Sbjct: 15 cttttgctctgcactcagtaaataataatttgtgaatgtgtagcaaaagacaggatgg 72
>32946_rno-mir-511:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 48/58 (82%)
Strand = Plus / Plus
Query: 20 cttttgctctgcagtcagtaaatannnnnnngtgaatgtgtagcaaaagacagaatgg 77
||||||||||||| |||||| ||| |||||||||||||||||||||| ||||
Sbjct: 15 cttttgctctgcactcagtacataatcatttgtgaatgtgtagcaaaagacaggatgg 72
