miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30599_ptr-mir-764:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatacagggaggaggc 60
Query: 61 catagtggcaactgttaccatgatt 85
|||||||||||||||||||||||||
Sbjct: 61 catagtggcaactgttaccatgatt 85
>26906_cfa-mir-764:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 61 catagtggcaactgtcaccatgatt 85
>27264_eca-mir-764:mirbase
Length = 109
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 14 aatctaggaggcaggtgctcacttgtcctcctccatgcttgggaaatacagggaggaggc 73
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 74 catagtggcaactgtcaccatgatt 98
>27265_eca-mir-764:mirbase
Length = 109
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 14 aatctaggaggcaggtgctcacttgtcctcctccatgcttgggaaatacagggaggaggc 73
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 74 catagtggcaactgtcaccatgatt 98
>28120_mml-mir-764:mirbase
Length = 96
Score = 137 bits (69), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 1 aatctaggaggcaggtgctcacttgtcctcctccatggttggaaaatacaggggggaggc 60
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 61 catagtggcaactgtcaccatgatt 85
>32353_mmu-mir-764:mirbase
Length = 108
Score = 97.6 bits (49), Expect = 1e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||| |||||||||||||||| ||||||||||||||||| |||| || |||||||||
Sbjct: 14 aatcttggaggcaggtgctcacatgtcctcctccatgctt-ataaatacatggaggaggc 72
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 73 catagtggcaactgtcaccatgatt 97
>32354_mmu-mir-764:mirbase
Length = 108
Score = 97.6 bits (49), Expect = 1e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||| |||||||||||||||| ||||||||||||||||| |||| || |||||||||
Sbjct: 14 aatcttggaggcaggtgctcacatgtcctcctccatgctt-ataaatacatggaggaggc 72
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 73 catagtggcaactgtcaccatgatt 97
>32995_rno-mir-764:mirbase
Length = 108
Score = 81.8 bits (41), Expect = 7e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||| |||||||||||||||| ||||||||||||||| | | || || |||||||||
Sbjct: 14 aatctcggaggcaggtgctcacatgtcctcctccatgcct-acacatacatggaggaggc 72
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 73 catagtggcaactgtcaccatgatt 97
>33456_bta-mir-764:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||||| ||||||||||||||| ||||| ||||| | || ||||| ||||||||||||
Sbjct: 1 aatctagtaggcaggtgctcactcgtccttctccacggtt-aaaaatacagggaggaggc 59
Query: 61 catagtggcaact 73
|| | ||||||||
Sbjct: 60 cagaatggcaact 72
