miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28124_mml-mir-770:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 60
Query: 61 ggcctgatgtggtgctggggcctcaggggtctgctctt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcctgatgtggtgctggggcctcaggggtctgctctt 98
>31246_ppy-mir-770:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 60
Query: 61 ggcctgatgtggtgctggggcctcaggggtctgctctt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcctgatgtggtgctggggcctcaggggtctgctctt 98
>30602_ptr-mir-770:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 2 ggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgg 60
Query: 62 gcctgatgtggtgctggggcctcaggggtctgctctt 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcctgatgtggtgctggggcctcaggggtctgctctt 97
>32356_mmu-mir-770:mirbase
Length = 94
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 5 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 64
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
Query: 65 tgatgtggtgctggggcctcaggggtctg 93
||| |||| ||||||||| ||||||||||
Sbjct: 61 tgacgtggagctggggccgcaggggtctg 89
>32357_mmu-mir-770:mirbase
Length = 94
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 5 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 64
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
Query: 65 tgatgtggtgctggggcctcaggggtctg 93
||| |||| ||||||||| ||||||||||
Sbjct: 61 tgacgtggagctggggccgcaggggtctg 89
>27271_eca-mir-770:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 5e-09
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 9 ccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcctgat 68
||||||| |||||||| |||||||||| |||||| ||||| || | | |||||| |||
Sbjct: 6 ccttccgtgcctccagcaccacgtgtctgggccatgtgagcaaggtcacatgggcccgat 65
Query: 69 gtggtgctgggg 80
||||||||||||
Sbjct: 66 gtggtgctgggg 77
>32996_rno-mir-770:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 21 ccagtaccacgtgtcagggccacatgagctgggcctcgtgggcctgatgtggtgctgggg 80
|||| |||||||||| ||||||| ||||| ||| ||||||||||| |||| |||||||
Sbjct: 9 ccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcctgacgtggagctgggg 68
Query: 81 cctcaggg 88
|| |||||
Sbjct: 69 ccgcaggg 76
