miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30603_ptr-mir-802:mirbase
Length = 93
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 2 ttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggaga 60
Query: 62 atctttgtcacttagtgtaattaatagctggac 94
|||||||||||| ||||||||||||||||||||
Sbjct: 61 atctttgtcactcagtgtaattaatagctggac 93
>28125_mml-mir-802:mirbase
Length = 94
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 1 gttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggag 60
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 gttctgttatttgcaatcagtaacaaagattcatccttgtgtccatcatgcagcaaggag 60
Query: 61 aatctttgtcacttagtgtaattaatagctggac 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 aatctttgtcacttagtgtaattaatagctggac 94
>31247_ppy-mir-802:mirbase
Length = 94
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 1 gttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggag 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 1 gttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcacgcagcaaggag 60
Query: 61 aatctttgtcacttagtgtaattaatagctggac 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 aatctttgtcacttagtgtaattaatagctggac 94
>27272_eca-mir-802:mirbase
Length = 93
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 2 ttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggaga 61
|||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttctattatttgcaatcagtaacaaagattcatccttgtgtccatcaagcaacaaggaga 60
Query: 62 atctttgtcacttagtgtaattaatagctg 91
||||||||||||||||||||||||||||||
Sbjct: 61 atctttgtcacttagtgtaattaatagctg 90
>26907_cfa-mir-802:mirbase
Length = 90
Score = 139 bits (70), Expect = 4e-34
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 2 ttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggaga 61
|||| ||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
Query: 62 atctttgtcacttagtgtaattaatagctg 91
||||||||||||||||||||||||||||||
Sbjct: 61 atctttgtcacttagtgtaattaatagctg 90
>32358_mmu-mir-802:mirbase
Length = 97
Score = 117 bits (59), Expect = 1e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 7 ttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggagaatctt 66
||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 8 ttatttgcaatcagtaacaaagattcatccttgtgtcaatcatacaacacggagagtctt 67
Query: 67 tgtcacttagtgtaattaatagc 89
||||||| |||||||||||||||
Sbjct: 68 tgtcactcagtgtaattaatagc 90
>32997_rno-mir-802:mirbase
Length = 96
Score = 117 bits (59), Expect = 1e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 7 ttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggagaatctt 66
||||||||||||||||||||||||||||||||||||| ||||| || || ||||| ||||
Sbjct: 7 ttatttgcagtcagtaacaaagattcatccttgtgtcgatcatacagcacggagagtctt 66
Query: 67 tgtcacttagtgtaattaatagc 89
||||||| |||||||||||||||
Sbjct: 67 tgtcactcagtgtaattaatagc 89
>31564_oan-mir-802:mirbase
Length = 93
Score = 81.8 bits (41), Expect = 8e-17
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 2 ttctgttatttgcagtcagtaacaaagattcatccttgtgtccatcatgcaacaaggaga 61
||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||
Sbjct: 3 ttctgtttcttgcagtcagtaacaaagattcatccttgtgtcctgtaagcaacagggagg 62
Query: 62 atctttgtcacttagtgtaattaat 86
||||||||||| |||| |||||||
Sbjct: 63 gtctttgtcactgagtgcaattaat 87
