miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26911_cfa-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>28130_mml-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>28129_mml-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>29015_hsa-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>31252_ppy-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>31253_ppy-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>33462_bta-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>30607_ptr-mir-876:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttc 80
||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttc 80
>27277_eca-mir-876:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctgagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>27276_eca-mir-876:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgaagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tgaagtgctgtggatttctttgtgaatcaccatatctgagctaatgtggtggtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>33003_rno-mir-876:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaa 62
||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||
Sbjct: 1 aagtgctgtggatttctctgtgaatcaccatatcaaatctaatgtggtggtggtttgcaa 60
Query: 63 agtaattcatagtgcttca 81
|||||||||||||||||||
Sbjct: 61 agtaattcatagtgcttca 79
>32367_mmu-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>32368_mmu-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
