miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28132_mml-mir-885:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>28133_mml-mir-885:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>29018_hsa-mir-885:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>31255_ppy-mir-885:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>31256_ppy-mir-885:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>30608_ptr-mir-885:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacggg 73
|||||||||||||
Sbjct: 61 gatagagcacggg 73
>26912_cfa-mir-885:mirbase
Length = 74
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>27278_eca-mir-885:mirbase
Length = 74
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>27279_eca-mir-885:mirbase
Length = 74
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>33464_bta-mir-885:mirbase
Length = 74
Score = 131 bits (66), Expect = 7e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 60
Query: 61 gatagagcacgggt 74
||||||||||||||
Sbjct: 61 gatagagcacgggt 74
>34137_ssc-mir-885:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
Query: 61 gatagagcacgg 72
||||||||||||
Sbjct: 69 gatagagcacgg 80
>34138_ssc-mir-885:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 ccgcactctctccattacactaccctgcctcttctccatgagaggcagcggggtgtagtg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9 ccgcgctctctccattacactaccctgcctcttctccacgagaggcagcggggtgtagtg 68
Query: 61 gatagagcacgg 72
||||||||||||
Sbjct: 69 gatagagcacgg 80
>27464_mdo-mir-885:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 tgagaggcagcggggtgtagtggatagag 67
|||||||||||| ||||||||||||||||
Sbjct: 43 tgagaggcagcgtggtgtagtggatagag 71
