miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31258_ppy-mir-888:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 ggcagtgctctactcaaaaagctgtcagtcacttagattacatgtgactgacacctcttt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcagtgctctactcaaaaagctgtgagtcacttagattacatgtgactgacacctcttt 60
Query: 61 gggtgaaggaaggctca 77
|||||||||||||||||
Sbjct: 61 gggtgaaggaaggctca 77
>28135_mml-mir-888:mirbase
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 ggcagtgctctactcaaaaagctgtcagtcacttagattacatgtgactgacacctcttt 60
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ggcagtgccctactcaaaaagctgtcagtcacttatgttacatgtgactgacacctcttt 60
Query: 61 gggtgaaggaaggctca 77
| ||||||||||||||
Sbjct: 61 agatgaaggaaggctca 77
>28139_mml-mir-892:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 2 gcagtgctctactcaaaaagctgtcagtcacttagattacatgtgactg 50
||||||||||||| | |||| || |||||||||| ||||||||| ||||
Sbjct: 1 gcagtgctctacttagaaaggtgccagtcacttacattacatgtcactg 49
>30615_ptr-mir-892b:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 2 gcagtgctctactcaaaaagctgtcagtcacttagattacatgtgactg 50
||||||| ||| ||| |||| || |||||||||||||||||||| ||||
Sbjct: 1 gcagtgccctattcagaaaggtgccagtcacttagattacatgtcactg 49
