miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31261_ppy-mir-891a:mirbase
Length = 79
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ccttaatccttgcaacgaacctgagccattgattcagtaaaatactcagtggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||||||||||||||||
Sbjct: 61 tgttgtgagggtcaaaaga 79
>30612_ptr-mir-891a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ccttaatccttgcaacgaacctgagccattgattcagtaaaatactcagtggcacatgtt 60
Query: 61 tgttgtgagggtcaaaag 78
||||||| ||||||||||
Sbjct: 61 tgttgtgggggtcaaaag 78
>30613_ptr-mir-891b:mirbase
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgtgagggtcaaaag 78
||||||||||||||||||
Sbjct: 61 tgttgtgagggtcaaaag 78
>28138_mml-mir-891:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||| ||||||||||||
Sbjct: 61 tgttgttagggtcaaaaga 79
>29025_hsa-mir-891b:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||| ||||||||||||
Sbjct: 61 tgttgttagggtcaaaaga 79
>31262_ppy-mir-891b:mirbase
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||| ||||||||||||
Sbjct: 61 tgttgttagggtcaaaaga 79
