miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28140_mml-mir-892b:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 tgcaatgccctactcagaaaggtgccatttatgtagattttatgtcactggctcctttct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcaatgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttct 60
Query: 61 gggtagagcaaggctca 77
|||||||| ||||||||
Sbjct: 61 gggtagagtaaggctca 77
>31264_ppy-mir-892b:mirbase
Length = 77
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 tgcaatgccctactcagaaaggtgccatttatgtagattttatgtcactggctcctttct 60
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttct 60
Query: 61 gggtagagcaaggctca 77
|||||||| ||||||||
Sbjct: 61 gggtagagtaaggctca 77
>30615_ptr-mir-892b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 5e-05
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 6 tgccctactcagaaaggtgccatttatgtagattttatgtcactggctcctttctgggta 65
||||||| |||||||||||||| | | |||||| ||||||||| ||||||||| ||
Sbjct: 5 tgccctattcagaaaggtgccagtcacttagattacatgtcactgtttcctttctgagtg 64
Query: 66 gagcaaggc 74
||| |||||
Sbjct: 65 gagtaaggc 73
>28139_mml-mir-892:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 55/67 (82%)
Strand = Plus / Plus
Query: 10 ctactcagaaaggtgccatttatgtagattttatgtcactggctcctttctgggtagagc 69
||||| |||||||||||| | | || ||| ||||||||| ||||||||| ||||||
Sbjct: 9 ctacttagaaaggtgccagtcacttacattacatgtcactgtgtcctttctgcgtagagt 68
Query: 70 aaggctc 76
|||||||
Sbjct: 69 aaggctc 75
