miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30616_ptr-mir-920:mirbase
Length = 74
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 gtagttgttctacagaagacctggatgtgtaggagctaagacacactccaggggagctgt 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gtagttgttctacagaagacctgaatgtgcaggagctaagacacactccaggggagctgt 60
Query: 61 ggaagcagtaaca 73
|||||||||||||
Sbjct: 61 ggaagcagtaaca 73
>28141_mml-mir-920:mirbase
Length = 75
Score = 109 bits (55), Expect = 3e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 1 gtagttgttctacagaagacctggatgtgtaggagctaagacacactccaggggagctgt 60
||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 1 gtagttgttctgcagaagacctggatgtggaagagctaagacacactccaggggagctgt 60
Query: 61 ggaagcagtaacacg 75
||||| ||||||||
Sbjct: 61 agaagcggtaacacg 75
>31265_ppy-mir-920:mirbase
Length = 73
Score = 101 bits (51), Expect = 7e-23
Identities = 71/75 (94%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 gtagttgttctacagaagacctggatgtgtaggagctaagacacactccaggggagctgt 60
||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1 gtagttgttctac-gaagacctggatgtggaggagctaagacacactcca-gggagctgt 58
Query: 61 ggaagcagtaacacg 75
|||| ||||||||||
Sbjct: 59 ggaaacagtaacacg 73
