miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33465_bta-mir-935:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 ggcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagt 60
Query: 61 taccgcttccgctaccgccgccgctcccgct 91
|||||||||||||||||||||||||||||||
Sbjct: 61 taccgcttccgctaccgccgccgctcccgct 91
>30621_ptr-mir-935:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 2 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 60
Query: 62 accgcttccgctaccgccgccgctcccgct 91
||||||||||||||||||||||||||||||
Sbjct: 61 accgcttccgctaccgccgccgctcccgct 90
>33010_rno-mir-935:mirbase
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 ggcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcggcggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagt 60
Query: 61 taccgcttccgctaccgccgccgctcccgct 91
|||||||||||||||||||||||||||||||
Sbjct: 61 taccgcttccgctaccgccgccgctcccgct 91
>34139_ssc-mir-935:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 7 ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 66
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
Query: 67 ttccgctaccgccgccgctc 86
||||||||||||||||||||
Sbjct: 61 ttccgctaccgccgccgctc 80
