miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31273_ppy-mir-938:mirbase
Length = 83
Score = 157 bits (79), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60
Query: 61 ctttaagaacttggtatgccttc 83
|||||||||||||||| ||||||
Sbjct: 61 ctttaagaacttggtacgccttc 83
>30624_ptr-mir-938:mirbase
Length = 81
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgtaccttcatgaaccatggtacac 60
Query: 61 ctttaagaacttggtatgcct 81
|||||||||||||||||||||
Sbjct: 61 ctttaagaacttggtatgcct 81
>28148_mml-mir-938:mirbase
Length = 75
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 5 gtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacaccttt 64
||||||||||||| ||||||| |||| || |||||||||||||||| |||||||||||||
Sbjct: 5 gtgtaccatgtgcacttaaagatgaagccggtgcaccttcatgaactgtggtacaccttt 64
Query: 65 aagaacttggt 75
|||||||||||
Sbjct: 65 aagaacttggt 75
