miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30625_ptr-mir-939:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgtgggcagggccctggggagctgaggctctgggggtggccggggctgaccctgggcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgggcagggccctggggagctgaggctctgggggtggccggggctgaccctgggcctc 60
Query: 61 tgctccccagtgtctgaccgc 81
|||||||||||||||||||||
Sbjct: 61 tgctccccagtgtctgaccgc 81
>28149_mml-mir-939:mirbase
Length = 83
Score = 145 bits (73), Expect = 5e-36
Identities = 80/81 (98%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 tgtgggcagggccctggggagctgaggctctgggggtggccggggctga-ccctgggcct 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tgtgggcagggccctggggagctgaggctctgggggtggccggggctgacccctgggcct 60
Query: 60 ctgctccccagtgtctgaccg 80
|||||||||||||||||||||
Sbjct: 61 ctgctccccagtgtctgaccg 81
>31274_ppy-mir-939:mirbase
Length = 80
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 14 ctggggagctgaggctctgggggtggccggggctgaccctgggcctctgctccccagtgt 73
||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 12 ctggggagctgaggctctgggagtggccggagctgactctgggcctctgctccccagtgt 71
Query: 74 ctgaccgcg 82
|||||||||
Sbjct: 72 ctgaccgcg 80
