miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>31280_ppy-mir-1180:mirbase
          Length = 69

 Score =  137 bits (69), Expect = 1e-33
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gctgctggacccacccggccgggaatagtgctcctggttgtttccggctcgcgtgggtgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gctgctggacccacccggccgggaatagtgctcctggttgtttccggctcgcgtgggtgt 60

                   
Query: 61 gtcggcggc 69
          |||||||||
Sbjct: 61 gtcggcggc 69




>27282_eca-mir-1180:mirbase
          Length = 70

 Score = 63.9 bits (32), Expect = 1e-11
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                  
Query: 10 cccacccggccgggaatagtgctcctggttgtttccggctcgcgtgggtgtgtcgg 65
          ||||||| |||||||||||||| |  | |||||||||||||| |||||||||||||
Sbjct: 11 cccacccagccgggaatagtgcacgagtttgtttccggctcgagtgggtgtgtcgg 66